Sol Genomics Network

Unigene SGN-U272369

Unigene Basic Information

Unigene ID:	SGN-U272369
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272369
mRNA sequence:	Length: 1257 bp

>SGN-U272369 Solanum tuberosum #4 (9 members)
CAGAAGTCGTTAAACGGATTTCCACTTATCAAACTTGTTCCTATGGCTGTTTTCAGTCCCAGTTGTTCTTCTACTTCCCCACTTCTCTCC
TTCAAAAACAACATCTCTTTCTTCCCTTCACACCGCCGTTGTTTTCCCGGAGTTCGCTGCACTTTCACAGTGAAAGCCACCGTCAGCGTC
GAGTCTCCGTCGTCTTCCGCCACCGACCGCTGTGATGACTCGCCCAAGGTTTTACTTGAAGTCCGGGACCTATGCGCTGTCATAGTCGAG
TCAAAGCAGCAAATTCTCAATGGTGTTAACCTCACTGTCCGCCAAGGCGAGGTTCATGCTGTAATGGGTAAGAATGGTTCTGGAAAAAGC
ACCTTTGCCAAGGTTCTTGTTGGGCATCCAGATTATGAAATTACAGGAGGCACCGTGTCATTTAAAGGTGAGAATCTACTTGAGATGGAA
CCTGAGGAAAGATCTCTTGCTGGTCTTTTTATGAGCTTCCAGTCCCCAGTTGCCATACCTGGAGTAAGCAATATTGACTTTCTTAACATG
GCGTATAATGCTCAAAGGAGGAAACTTGGACTGCCAGAGCTGGGACCAATTGAGTTTTACGGGTACATTGCCCCGAAGCTTGAACTTGTC
AACATGAAGATAGACTTCTTGAACAGAAATGTAAATGAAGGATTCAGTGGTGGAGAAAGGAAGCGCAATGAGATTCTGCAACTAGCGGTT
CTCGGGGCTGACTTGGCAATACTGGATGAGATTGATTCTGGTTTAGATGTTGACGCACTTCGAGACGTAGCAAAGGCAGTAAATGGACTT
CTATCGCCAAAGAATTCGGTGTTGATGATTACGCATTACTTACGATTATTAGAATTCATCAAGCCGACATATATCCATATCATGGAGAAA
GGGAGAATCGTGAAGACTGGAGACATATCAATAGCAAAAGTTCTGGAGAAAGAAGGCTACAAAGCAATTTCTGGCCCATAGAGCTGCAAT
GAATGATGATGATTTTTTTCGTTGTCTCATCAGCTACTAGAGGAAATATTTCTACTGCTCCAACATTATTTAAGGAAGTGGCAATAAGTG
ATGCTTCCACTTTTCTCATCAAATGATTCAAAAATATCAGTGCTCAATTGTCTCAACATGTAAGAGTAAGGATAAACTATGTCCTCTGAT
GTAGGCAAAATGAGGAATTTTTATGACATGGGGGATCGAGTCATATACTTGTATTTTATCCCGTCTTTTTTTTTTTTTTTCTAAAGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	SWST	Stolon	5942	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	16	ThiQ_ABC_transpt ABC_transporter Sulph_transpt1 CbiN_ATP	404
2	24065	ThiQ_ABC_transpt NtrCD Drr_ABC_transpt ABC_transporter CcmA IISP Sulph_transpt1 CbiN_ATP	9
5	59305	ThiQ_ABC_transpt NtrCD Drr_ABC_transpt ABC_transporter CcmA IISP Sulph_transpt1 CbiN_ATP	6
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	120737	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) FeS assembly ATPase SufC - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	8
5	130998	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) FeS assembly ATPase SufC - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U245931	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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