Sol Genomics Network

Unigene SGN-U272468

Unigene Basic Information

Unigene ID:	SGN-U272468
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272468
mRNA sequence:	Length: 1532 bp

>SGN-U272468 Solanum tuberosum #4 (10 members)
GAGAACTACTCTCGAGTTTTTTTTTTTTCGGTCTTCTGCTGCACTTTCCTTCTCTCTTTCAAATTCTTTTTTCTCTCCACAAATTCATAT
TGAAGAAGCAAACTTCAAGAACCATTTTTCTTCTTCTTTTGAAAAACCCAAATTTCTCAAAGTGAAGAAAAGGAAGAGAAACGAAGCAGT
AGAAGAGAAGATGGGGGTTGATTATTACAAAGTATTGGGTGTTGATAAGAATGCTACAGATGATGATTTGAAGAAAGCTTATAGAAAACT
TGCCATGAAATGGCATCCTGATAAGAACCCACAAAACAAAAAAGAAGCTGAAGCTAAGTTCAAACAGATCTCTGAAGCTTATGATGTGCT
TAGCGACTCCCAGAAAAAAGCTGTGTATGACCAGTATGGTGAAGAAGGGCTGAAGGGTGGGGTGCCACCGCCTGGAGCTGGTGGTCCCGG
TGCCGGTTCAACCTACTTTTCTACTGGGGATGGCCCTACTTCATTCAGATTCAACAGTAGAAATGCTGATGACATATTTGCTGAATTTTT
CGGCTTTTCTACTCCATATGGACCTGGAGGGGGTAGGGGTTCAAGGTTTGGTAATATGTTCACTGATGATATATTCGCAGCATCCTTTGC
TGAAGGAGGAGGTGGTGGTGGTGGTGTTCCCATGCATCCATCAGTCCCAAGGAAAGAGGCTCCGGTACAACAGAACTTGCCTTGTAATCT
TGAGGATCTCTACAAGGGTACCACCAAAAAGATGAAAATTTCTAGAGAAATTGTCGATTCGAGTGGCAAGAGAATTGTGCAAGAGATTCT
GACAATCGAAATTAAACCTGGTTGGAAGAAAGGTACAAAGATCACCTTCCAAGAAAAAGGGAATGAGCAGCCAGGTGTTATACCAGCTGA
TCTGGTCTTCATAATAGATGAGAAACCTCATAAGGTTTTCTCGCGTGATGGAAATGACTTGATTGTCTCTCAAAAGATTTCTTTGGCTGA
AGCGTTAACCGGTACTACAGTCCATCTCACTACTCTGGATGGAAGGAACTTAACAATTCCAATCAACAACGTGATTCAACCAAATTATGA
ACATGTCGTCCCAGGTGAAGGCATGCCGCTTCCAAAAGACCCGTCAAAGAAAGGGAATTTGAGGATCAAATTTGACATCAAGTTCCCTGC
TCGTCTCACTATGGCTCAGAAATCTGGTATCAAAGAGCTGTTGGGTTCTTGAGCTTTATGCACAGCTTTGGTGCCGGTTTTGTTCTGTGT
AAATATTTTCGTAAAACCATTTGAAGCTATGGAGTGGGGCGTTGGTTTAGGCTCGTAGGCGAGTCTCTTCCTTAGCAAAGTAGAATTTTG
TTCTTGTTTTTTATGGGTATTGTTCAATGTATCCATTCAACAACAGGCAATACTTCTTCTTTTTTTGGAATAAGTCTTCAAAATTCACAG
GCCTCGCAGCTGTTGAATCATTAGTGTTTTCTTGCTTTGTCTGTTATGAATGTTTTCAGAAATAGAGAGGTTGGGTTTAAGTTAAAAAAA
AA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	3
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	21988	DnaJ_N	254
5	56531	Hsp_DnaJ DnaJ_C	33
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118427	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	212
5	129234	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Chaperone DnaJ C-terminal - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) HSP40/DnaJ peptide-binding	29

Preceding Unigenes (2)

Unigene	Build
SGN-U248358	Solanum tuberosum #3
SGN-U260487	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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