Sol Genomics Network

Unigene SGN-U272656

Unigene Basic Information

Unigene ID:	SGN-U272656
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272656
mRNA sequence:	Length: 1618 bp

>SGN-U272656 Solanum tuberosum #4 (10 members)
GTTCGAAGCAAAATTTCTCTGTCCCGCTTTCAACAGCCAAGTCTGGTAACCTGCCGCTGATATGGGTAGCTCTTCTAATGGCGCCGCCCC
TAACAACAACGTAGACAAGGGCGTCGATTATGCTAACTATTTCTGCACTTACGCCTTTCTCTATCACCAAAAAGAGATGCTCTCTGATCG
TGTTCGTATGGATGCTTACTATAATGCGATTTTCCAAAACAAACATCATTTTGCTGGAAAGGCTGTTTTGGATGTAGGGACAGGGAGCGG
CATATTGGCATTATGGTCTGCACAAGCAGGTGCAAGGAAAGTTTATGCAGTCGAAGCCACCAAGATGGCAGAGCATGCTCGTGAACTTGT
TAAAACCAATGGATTTGAGCATGTTGTTGAAGTGATTGAGGGGTCAATGGAAGATATTACTCTGCCGGAGAAGGTTGATGTAATCATTTC
AGAGTGGATGGGATACTTCCTTCTACGTGAATCAATGTTTGACTCAGTTATCTGTGCTCGGGATCGTTGGTTGAACCCAGATGGAGTTAT
GTACCCAAGCCATGCTCGAATGTGGGTCGCACCAATCCGCTCTGGATTAGTGGATCAAAAGAAGATTGATTATGAAAGAGCGATGGATGA
TTGGTCCCATTTTGTCAATGAGACGAAAACGTTTTATGGTGTGGATATGGGCAGTCTGACTAAGCCTTTTACGGATGAGCAGAGAAAATA
CTATCTACAGACATCATTGTGGAACAACCTTCATCCAAATCAAGTAATTGGAAAACCTGCTGTCATAAAGGAGATTGATTGTTTAACGTC
AAGTGTGAATGATTTACTCAGTCTTCAGGCAAATATCTCATCAATCATTACTGCAGAAAATACACGATTTTGTGGGTTTGGTGGATGGTT
TGATGTCCACTTTCGAGGACGCAAGGAGAATCCAGCTAAAAATGAGATTGAGTTGACAACAGCTCCAAGTGAAGACCTTGGAACACACTG
GGGGCAGCAGGTGTTCTTGTTTTATCCATCCACACGTGTTAGCCAAGGAGATAACATGGCAATGAATTTCTCAATGAATCGCTCTAAAGA
AAACCATCGGTTGTTGGAAGTTGAGTTTGATTGTGAGCTTAGACAATCTTCTGGAAATTCACTTCCATCATTCAGTAAAAAGTTTTATAT
AGAATGAGGAGCACGGCCTGATTTTTCGAAGTGTCATGTCTAAAGGCCAATGGGAGGATCGCTACGCCCCCCTCAGAATGAAATTCAGCC
ATTTCTGCCAGCTGACTTGTGCTGTTGTGTCTTGCCCCCTCGACTCTTATGCCCCCTTCTCAACAAATTTGCCTCTTAAATCATTTTGCA
TTTTTCTCTTCTTTTTTTTTTTTTTTGGTTTGGGCCTGGAAATGAGGGGGCGCGCTAGAAGCTTTGGAATGTTTTGTAAGCATGCAGGAT
CACCCACCTACAATTTGTGCGGGAAATGAAGGGCTGGTAGTGTCCGCCTTAAACGCAAGTTTGTATCTTAAGACGAAACTAGTGCTACTT
TCTCTTGTCAATGTACAAGTATTCTGTAGTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	362	SAM_bind FkbM	46
2	22332	SAM_bind FkbM	34
5	60483	SAM_bind FkbM	5
1.1	101752	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757)	40
2	119150	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757)	19
5	133133		4

Preceding Unigenes (1)

Unigene	Build
SGN-U247745	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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