Sol Genomics Network

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Unigene SGN-U272680

Unigene Basic Information

Unigene ID:	SGN-U272680
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272680
mRNA sequence:	Length: 1647 bp

>SGN-U272680 Solanum tuberosum #4 (9 members)
CGCAGCTTCGTGCTTGAATTGATAACACTTGGGCTACTGCTGAAAATTTCGATTTGAGAAATCCATTTTCGAGATTTACAGCATTCAGCA
ATGGATTCGATGCTTCCGATTGCGATTCTGTCGGCGATCATCGGAATTGTGATTGCTTTTCTAGTTTTCGGGAACTATTTCCAAAAGAGG
AAATCGGAAGTTGAATCTGTCGCCAAGCCGGAGACAATTCAAACCAATCAGAAGACTTCAAAGCCTCAGCATTCTCACAAAAATACTTCG
AAGAAAACGCAAGCTAAATCACATTCTCACACCGCCGATCATAAGGATGCAAACAAAAGGCATCACCCACTGGACTTGAATACTCTAAAG
GGTCATGGGGATATTGTCACAGGAGTTTGCTTCTTACCCAATGCACAGTCTTTGGCAACTGCTTGTGCTGACGGCGTTGTTAGGATCTTC
AAGTTGGATGATGCTTTGAGCAAAAGCTTTAAGTTTCTGAGAATTAATTTGCCTGCTGGAGGTCATCCGATTGCAGTTGCAGTTGCTGAT
GAAGCTTCCTCGGTTGCAGTGGCATGCCATGCTCTTTTTGGTTCTTCCCTGTACATGTATGGTGAAGAGAAACCTAAAGCAGATGCTGAT
TCCAAACAGGCCAAGCTTCCTCTTCCACAAATCAAATGGGAACAGCATAAAGTTCATGACAAGAGAGCAATCCTAACTCTAGTTGGTACC
AAGGCAACTTATGGTACTGCTGATGGGAGTACCATCATTGTTTCATGTTCTGAAGGTACTGATATTGTGCTTTTTCACGGAAAAAGTGGC
AAGATTGTTGGAAACGTCGATACTAATCAACTCAAAAACAACATGGCTACTATATCTCCCAATGGACGTTTTATAGCTGCCGCAGCTTTT
ACCGCTGATGTCAAGGTTTGGGAGATTGTGTACTCGAAGGATGGTACTGTAAAGGAGGTTTCAAGGATTATGGAGCTCAAGGGGCATAAG
AGTGCAGTGACGTGGCTATGCTTTAGCCCGAATTCTGAACAAATAATCACTGCATCGAAGGATGGTACAATCAGAATGTGGAATATTAAT
GTGCGCTATCACCTTTCTGAGGACCCTAAGACATTAAAGGTGTTCCCTATTCCCCTTAAAGATGCAAGTGGTACAACTTTACACTATGAT
CGTTTATGTGTATCCCCTGATGGAAAGATATTGGCCACCACTCATGGTTCAATGATGCAATGGCTATGTATGGAGACTGGGAAGGTTCTG
GAAACAGCTGAAAAAGCACATGATGGTGATATCACTGACATGGCATGGTCGCCTTCTCCGATTCCAATGGGTGACAAGCAAGTTCTGGTG
TTGGCCACAGCCAGTGTCGATAAGAAAGTGAAGTTGTGGGCAGCTCCATCCCTGAATGCATCATGAATGAGCGACGGAACCTTTCCCCAT
GAATGACACAAGTATTTGATGTCTCGACCAGTTTTTTGAACTAATAGATCATAGGGGGGACTGACGATCAGAAGAGGAGAATACAGCCGA
AGTTAGAGGATTGAGTGCTTACATCTTTTGAGGGCTTTTGTTATTCAAAGATTAGACTTAACCAGAATGTGGTAAAGCTAGAGAAATTTT
TTGATGTTTAATTTGAATGTATATTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	6	WD40	833
2	24730	WD40 MttA_Hcf106	7
5	58757	WD40 MttA_Hcf106	7
1.1	101368	WD-40 repeat	806
2	122535	WD-40 repeat WD40-like	5
5	132736	WD-40 repeat WD40-like	5

Preceding Unigenes (1)

Unigene	Build
SGN-U246208	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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