Sol Genomics Network

Unigene SGN-U272782

Unigene Basic Information

Unigene ID:	SGN-U272782
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272782
mRNA sequence:	Length: 944 bp

>SGN-U272782 Solanum tuberosum #4 (8 members)
TTCATTTTCTTCTCCTCTCTGCTTTTATCTCTTTATACGACATCGTTTCTCCACCGCTGCTGCTGCTCAGACTTCCTTTTTACAGCTTTT
TCGGTCGATCGGTTTGTTTTCAGACCATATCTCAAAGTCAAGTCTACTCGATCCAGTTTTTTTTGCAGCAGTTGCTTAGACGGGAAAATG
TTGGAGGCTCCAAAGTTTGCGGGACTTATAGACTTAAATGAAAACCCTGATCATTATGGACTCTCACAAAATTTTTACCATAAGCTTGAT
GAGGGATCACACATGTCAATCGATAGTTATGGGAGCTTGCAGATGAGCAATGGTGGAGGTTCAGTTGCAATGTCCATGGATAACAGCAGT
GTTGGATCAAATGATTCGCACACTCGTATTTTAAACCATCAGGGTCTTAAGCGTGTTCACAATAACTATTCGGTTGCAGCTAGTGTAAAT
AAGGGAAAAGCTTCGCATGGGTTGAGTGATGATGCCCTAGCTAAAGCGTTGATGGATCCTCGATTTCCTACCAATGGGCTTGAGAATTAT
GATGAGTGGACGATTGATTTGAGGAAGCTCAACATGGGGCCAGCTTTTGCTCAAGGGGCTTTTGGGAAACTATACAAAGGAACTTATAAT
GGTGAGGATGTTGCTATCAAGCTTCTAGAGAGGCCGGATAATGATCTTGAGAGGGCTCACTTGATGGAGCAACAGTTTCAGCAGGAAGTT
ATGATGTTGGCAAGGTTGAGACATCCAAATATTGTTCGGTTTATCGGTGCATGCCGTAAACCCATGGTGTGGTGTATTGTCACTGAATAT
GCTAAAGGAGGATCAGTTCGTCAGTTTCTCACTAGGCGACAAAATCGATCTGTGCCCTTGAAGTTAGCAGTGAAGCAGGCCTTGGATGTG
GCAAGGGGTATGGAATATGTGCATGGGCCTGAATCTGATACATC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TBSK	Tuber Skin	4812	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	25094		7
5	59098		7
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	121340		7
5	130451	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U246626	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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