Sol Genomics Network

Unigene SGN-U272796

Unigene Basic Information

Unigene ID:	SGN-U272796
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272796
mRNA sequence:	Length: 1375 bp

>SGN-U272796 Solanum tuberosum #4 (10 members)
CGTACGTGTCTTGTCCTTCATACTGAACACACCTTGGGTATCTGGAGTGTATAAGAGAAGATACTGGGAAGAAATGGAAGCTCTACTTGT
AAGAAAACTGGGCGACCCAACTCTGCCACCAAATGCCTCGGAGAATTCATCACTCGATCTCTCAACCTCCCACCCTATTCCTAATTTGGA
ATCGCCAACCTCCGTTAGAGTTCGAATCAAAGCCACCAGCTTGAATTTCGCAAATTATCTCCAAGTCCTTGGCAAATACCAAGAGAAACC
CCCTTTACCCTTCATCCCTGGCTCCGATTACTCCGGTGTTGTTGAAGCCGTTGGCCCTAATGTCACTAAGTTCAAAATTGGAGACCACGT
TTGCTCTTTTGTTGCCCTTGGCTCATTTGCTCAATTCATCGTCGCCGATGAATCCGACTTGTTTCAAGTACCTGATGGATGTGATCTAGT
TGCAGCTGGTGCACTTCCTGTTGCATATGGGACATCACATGTGGCTCTGGTGCATAGAGCGCAGCTGCGTCCCAAACAGGTATTACTGGT
ACTTGGAGCAGCTGGAGGCGTTGGGCTCTCGGCAGTACAAATTGGGAAGGCTTGTGGTGCGACAGTTATTGCAGTGGCTAGGGGAAATGA
AAAGGTGCAGTTTTTGAAATCTTTAGGTGTTGATCATGCAGTAGACTTGAGCAGTGCAAACGTCATTGAAAGTGTCAAGGGCTTCCTGAA
GTCAAGAAAGCTCAAAGGGGTTGATGTCTTGTATGATCCAGTCGGTGGGAAGCTTACAAAAGATAGCTTAAAGCTATTAAATTGGGGGGC
ACAAATTCTGGTTATTGGATTTGCAAGTGGGGAAGTACCTGTCATCCCAGCCAACATTGCGTTGGTGAAGAACTGGACAATTCATGGACT
GTATTGGGGAAGCTATAAGATACATCAACCCAATGTGCTTGGAGATTCTCTGAAGGAGCTTCTATCTTGGTTGTCTAAGGGTTTGATTAC
AGTCAACATTTCTCGTACATTCAGCCTGGCAGAGGCCCATCTTGCTTTTACTGCTCTCAAAGATAGGAGAGCAATTGGCAAGGTGATGAT
AACATTCGATGATGGGAAAATCGTCAAGTCCAAGCTTTAATTGTAGTGATCGACTAAGAATGACTCGAGGTGCAGAAGATTTTCCTGCTG
CGTGACTATCAAGATTATACACCATCCTATGGCTTTTCGTCACTAAGGAGGTACTGCAATCAATAAATAAGTGGAACTTGTATTTTGTAT
TAAAGAAAGAAAGAAATATAAGGTAATAGATGCTATTGCAACGTAAAAATAAACATACATGAAAATTTGAGTGAAACAAAGTATAATCTA
GCTTGAATGTTTACTTCTTAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	115	Adh_zn_family	112
2	23672	Tdh Adh_zn_family BchB	11
5	59435	QOR_zeta_crystal Tdh Adh_zn_family BchB	6
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	122520	Alcohol dehydrogenase GroES-like Quinone oxidoreductase/zeta-crystallin - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5
5	132720	Alcohol dehydrogenase GroES-like Quinone oxidoreductase/zeta-crystallin - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5

Preceding Unigenes (1)

Unigene	Build
SGN-U247121	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer