Sol Genomics Network

Unigene SGN-U272874

Unigene Basic Information

Unigene ID:	SGN-U272874
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272874
mRNA sequence:	Length: 1677 bp

>SGN-U272874 Solanum tuberosum #4 (8 members)
GTTGCCTGGAAGCAATTTCACAAGATTTCTATATAAGAGTGAACTTTAAGAAGAATTACCAAAACCCCATTTGCCTGAAAGCAACTTTCA
CTTTGGGTGTTCAAGATTTCAATAAAAAAGTGATTTTTAAGAAGAATTCAAGAACCCCAGTTGCCCAAGAAGCAATTTTTACTGTGATTT
AACAAAATTTAGCTATGAAGAAAGGATCTTTTGCTCCTAATCTTAAACTTTCTCTTCCTCCTCCTGATGAAGTTGCTCTCTCCAAATTCC
TGACTGAATCAGGAACATTTAAGGATGGAGATCTTCTGGTGAATAGAGATGGAGTTCGAATTGTTTCGCAGAGTGAAGTTGCAGCTCCTT
CAGTTATACAGCCATCAGACAACCAGTTATGCTTAGCTGATTTTGAAGCAGTTAAAGTTATTGGAAAGGGAAATGGTGGTATTGTGCGGC
TGGTTCAGCATAAATGGACAGGGCAATTTTTCGCTCTCAAGGTTATTCAGATGAATATTGACGAGTCCATGCGCAAACATATTGCTCAAG
AACTGAGAATTAATCAGTCATCCCAGTGTCCATATGTTGTCATATGCTATCAGTCGTTCTTCGACAATGGTGCTATATCCTTAATTTTGG
AGTATATGGATGGTGGTTCCTTAGCAGATTTTCTGAAAAAGGTCAAAACAATACCTGAACGATATCTTGCTGTTATCTGCAAGCAGGTTC
TCAAAGGCTTGTGGTATCTTCATCATGAGAAGCATATTATTCACAGGGATTTGAAACCTTCGAATTTGCTAATCAATCATAGAGGTGATG
TCAAAATCACAGACTTTGGTGTGAGTGCAGTACTGGCAAGCACATCTGGACTGGCTAATACCCTTGTCGGAACATACAACTATATGTCTC
CAGAGAGAATTTCAGGAGGTGCCTATGATTACAAAAGCGACATTTGGAGCTTGGGTTTAGTCTTACTCGAGTGTGCAACAGGTCATTTCC
CATATACACCACCCGAGGGAGATGATGGCTGGGTCAACGTCTATGAACTTATGGAAACCATTGTTGACCAACCAGAACCTTGTGCACCTC
CTGACCAATTTTCTCCACAATTCTGCTCATTCATATCTGCATGTGTCCAGAAGCATCAGAAGGACAGACTGTCAGCAAATGAACTCATGA
GTCACCCTTTCATCACCATGTACGATGACCAGGATATCGATCTTGGATCTTACTTCACTTCCGCAGGACCTCCATTGGCAACACTCACTG
AGCTATAATTGGTTTTCTACAATGTCTTGCAACTGATGGAATTTTGGTCAATTAGCTTTTCCAGTCGCAACGTTCCAAAAATTAGAAGCC
TTTTAAGAAGGCATTGAGAATCAAAATGAAGCAGATGGAGCCATTGTTGTACTTTTCAAGCCTCCGGTAGGTAGCGTTGGGAGTGTAACT
GTGACATTTTCTACTATGTATGTGATTCAAATGGGAACAACTCCAGATATCCTTTTGATATGACTTATTTTTGACATTAATCCTTGGTGG
TGCAAGTGTTTTTGGTTTACAATTTGACTTCTACCTTTTAGCACATGAAGTTGTTTATTGTCAGTGTTGAACTGAATGTAAAATTATTAA
GCTCCCATTTCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCGAAAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	56709	Prot_kinase	25
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	130517	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U247855	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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