Sol Genomics Network

Unigene SGN-U272893

Unigene Basic Information

Unigene ID:	SGN-U272893
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272893
mRNA sequence:	Length: 1697 bp

>SGN-U272893 Solanum tuberosum #4 (7 members)
TGAAGATTCACTGCGGAGCTTATATTTGATCGTTTTTACTCTACCACCAGCAGATCTCCACCGGAAAGCTTCTCTACGACAGCTTTTCCG
ATCTGCGATATTGATCGGAATCCGTAGTACTTCACATGGCAGGGGCGGCGTCCGCGCTGTTCCTCCTTGACATCAAAGGCCGGGTGCTCG
TCTGGCGTGATTACCGTGGAGACGTCACTTCCGTTCAAGCGGAACGATTCTTCACCAAGCTCATTGAAAAAGAGGGTGATCCTCTGGATC
CTGTAGCATATGATAATGGCGTGACCTATATGTTTATACAGCATAACAATGTGTATCTCATGACTGCATCAAGGCAGAACTGTAATGCAG
CTAGTCTCCTTCTGTTTCTACACCGTGTTGTAGATGTATTCAAGCATTATTTTGAAGAGTTAGAAGAAGAATCCCTTCGCGATAATTTCG
TTGTAGTGTATGAGCTACTGGATGAAATGATGGACTTTGGTTATCCTCAATATACTGAAGCAAAAATTCTCAGTGAGTTCATAAAAACTG
ATGCATATAGGATGGAGGTTACACAAAGGCCTCCAATGGCAGTTACAAATGCTGTGTCCTGGCGTAGTGAAGGGATAAACTACAAGAAGA
ATGAAGTGTTTTTGGATGTTGTGGAGAGTGTTAATATACTTGTAAACAGCAACGGGCAAATAGTGAGATCAGATGTTGTTGGTGCACTGA
AGATGAGGGCATACTTGAGTGGCATGCCTGAGTGTAAGCTTGGTCTTAATGATAGAATGTTGCTGGAAGCACAAGGGCGAACTACCAAGG
GGAAGGCCATTGATCTTGATGATATCAAGTTTCATCAGTGTGTTCGCTTGGCCCGATTTGAAAATGATCGCACTATATCATTTATACCGC
CAGATGGAGCCTTTGATCTTATGACCTACAGACTTGGTACTCAGGTAAAGCCTCTCATATGGGTAGAAGCTCAAGTGGAAAGACATTCTA
GGAGCCGTATGGAAATTGTGGTTAAAGCACGGAGCCAGTTCAAGGAACGAAGTACTGCAACTAATGTTGAAATTGAGTTACCTGTGGCAA
CGGATGCTACAAATCCAAATGTCCGAACATCAATGGGATCGTCTACTTATGCACCTGAAAAAGATGCACTGATTTGGAAAATAAAATCTT
TCCCAGGTGGTAAGGAATATATGTTGAGAGCGGAGTTTACTCTTCCCAGTATTACAGCAGAAGAATCAGTTCCTGAGAGAAAAGCTCCTA
TACGTGTGAAATTTGAAATTCCTTATTTTACTGTTTCTGGTATACAGGTTCGCTACTTGAAGATTATTGAGAAAAGTGGCTATCAGGCTC
TTCCATGGGTGAGATATATTACTATGGCTGGTGAATACGAGTTAAGACTAGTATAAGGTCAAAGCACAGATGATGTTTCCAGCCAATTGA
GTTTGTAGAAGGCCTCAGGTAACTCCCAAGTTCTAAAATTTTGAGCTGCTTGGCAAAAGGCAACTGCTCGTTCACACCGGATGTTAAACA
AAATATTTTCCAGGGCCAGTTTTGTTGTTTGTAAGACTCTGATATGTAATAGTGTTCATTTGCTTGTATCATAAACTTTTGACGATAAGT
TTCATAGCAATATTTCTTCAAGGCAGATTCCAACTTCCTATTGCTTGTATGTAAATTCATCTTGTGCTATTATAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	473	Clat_adaptor_s Clathrn_med	38
2	22389	Clat_adaptor_s Clathrn_med	32
5	57973	Clat_adaptor_s Clathrn_med	10
1.1	101795	Mu2 adaptin subunit (AP50) of AP2 Longin-like - Biological Process: transport (GO:0006810) Clathrin adaptor complex medium chain - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: clathrin vesicle coat (GO:0030125)	36
2	118862	Mu2 adaptin subunit (AP50) of AP2 Longin-like - Biological Process: transport (GO:0006810) Clathrin adaptor complex medium chain - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: clathrin vesicle coat (GO:0030125)	27
5	130568	Mu2 adaptin subunit (AP50) of AP2 Longin-like - Biological Process: transport (GO:0006810) Clathrin adaptor complex medium chain - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: clathrin vesicle coat (GO:0030125)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U247106	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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