Sol Genomics Network

Unigene SGN-U272979

Unigene Basic Information

Unigene ID:	SGN-U272979
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272979
mRNA sequence:	Length: 1701 bp

>SGN-U272979 Solanum tuberosum #4 (9 members)
AAGAAATTTTCCCTCTAAAAGACTTCCATAAGACTCTCAAGAATCTTGGGATCCATCCCATTTCACTTCTTTGGAAACCTCAAAAAAAAA
AAAAAAACCCAAAAAAACAGCAAGATCACCTGTTTTTGTTTTCTGCTATTTTTTGAGGCTCTGATTTTCGTTGATATCATATACAGAGGG
TCATTGGTGCATCCTAAAGTTATGACTTGCTTCCCTTTGTTCCGTAGAAAACATCAGTCATCAACCAGGCATGCATCTGAATTTAATGAT
GAGCTCTCTGGCGTCAAGAATGTCACTCTTTTCTCCTATAAGCAGTTAAGAATCGCCACCGATGATTTTAGTACTGTGAATAAAATTGGA
GAGGGTGGATTTGGTTCTGTTTATAAGGGAAGGCTAAAAAGTGGAAAGATGGCTGCTATAAAGGTTCTTTCAAGTGAATCAAAGCAAGGT
GTCAGGGAGTTCTTGACAGAAATTAAAGTAATTTCAGACGTTGACCATGAAAATCTAGTCAAACTCTATGGCTGTTGTATAGAAGACGAT
CACAGGATATTGGTCTACAACTATCTTGAAAATAACAGCCTTGCTCAAACGCTTCTTGGTGGAGGACACAGTAGCATCCAGTTCAGTTGG
AGAACAAGGACTAAAATTAGCATTGGAGTTGCGAAGGGGCTAGCTTATCTTCATGAGCAAGTGAAGCCACATATAATTCACCGTGATATC
AAAGCGAGTAATATTCTCCTTGACAAAGACTTGACACCCAAGATTTCAGATTTTGGCCTGGCAAAGCTCATTCCCCCCAACGCTACTCAT
GTTAGTACACGTGTGGCAGGAACCATTGGTTATTTGGCACCAGAGTATGCAATTAGAGGCCAGGCAACACGTAAATCAGATGTCTACAGT
TATGGTGTTCTTCTGATAGAAATCGTCACTGGAAGATGCAACACAAACTCGCGTTTACCTATTGACGAACAATATCTCCTTGAAAGGGCG
TGGCAACTTTATGAAAGAAAGGAGTTGGTATTGCTAGTAGACACGTCTCTAGACGGGGATTTTGATGCTGAACAGGCCTGCAGATTCTTG
AAGATTGGGCTCCTTTGCACTCAAGACTCCTTAAAGCTGCGGCCATCCATGTCTACGATTCTCAAGATGCTAACCGGTGAGATGGAGGTC
AATGACAATAAGATAACAAAACCAGGCTTGATCTCCGATTTCATGGATCTCAAGATTAAAAGTAGTGTGCCTGAACAAATTAACGCTGCA
TATGATTACGTCTTATCAGACAATACAACAACGTTGCCATCCACGAGTTCTTCTCAAGGTAACTCGACATTCACAACCGCTGCATATGAT
CAAAGCATTTGAGCTTAGATTTTTTGAGTGAATTGGAAAATTTTGGAGTGGTGGAGGGAAGGTAAATAGTTTGTATTTGGTTGAATATTA
CTTTCAACTTTGTTTTATTCTCTTTTTTTCCCCTCTGTACTTTTTTTTTTTTTTTCTGTATATGTAAATTGGTCATGTTGTTAGAAATAG
TGTATGTTGTAAATTTGAGGTGTTGAATTCAAGAAATGTAATTTCTCTAGCAGGTATACTTCTAATTGTTTATATTATTAGTATTGTATT
GTAAATGTTATTATTTTGAAATTGCCATTGTAAAACGGACACTTTGTCCAAGGGGTCTTTTGGTACATTAATCTTTAATGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	3
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21970	Prot_kinase	1313
5	56255	Prot_kinase	690
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (1)

Unigene	Build
SGN-U246292	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer