Sol Genomics Network

Unigene SGN-U273168

Unigene Basic Information

Unigene ID:	SGN-U273168
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273168
mRNA sequence:	Length: 1422 bp

>SGN-U273168 Solanum tuberosum #4 (9 members)
CTTCCTTCTCGCGAATCAAAAATATGGATGCGATAGTACAGCTGCCTTACGATGCTACGGTACGGGTGATGCTGGGTTCTCTAGAGCGCA
ACCTCTTGCCGGACACTGTTATACGGCGGCTCATTCGACTGCTCTTAGCCGCCCGACTTCGCTCCGGTTACAAACCATCCTCTGAGCTAC
AGCTGTCTGATCTTCTCCAATTTGTGCACTCTTTAAAAGAGATGCCTATAGCTGTGATGACTGAGGAGCCAAAGTCCCAACATTATGAGC
TCCCTACCTCTTTCTTCAAGATTGTTCTTGGAAAACACCTCAAATACAGCTGCTGTTACTTCAAAGACAAGTTGAGCACTTTAGAGGATG
CTGAAAAAGCAATGATGGAATTATATTGTGAAAGGTCACAGTTGAAAGATGGACACACTGTACTTGATGTTGGTTGTGGCTGGGGCTCCC
TTTCTCTATATATAGCACAAAAATATAGTGCCTGTAAAGTTACCGGTATTTGCAATTCAGTCACCCAAAAAGCACACATAGAAGAGCAGT
GCAGGGAGCTTCAGCTGCAGAATTTGGAGATCATAGTTGCAGATATTAGCACATTCGAGATGGAAGAATCCTATGATAGAATATTGTCTA
TTGAAATGTTTGAGCATATGAAGAACTATGGAGATCTCCTGAAGAAGATGTCAAGATGGATGAAGGCAGATAGTCTTCTTTTTGTTCATT
ATTTTTGCCATAAAGCATTTGCTTACCACTTTGAGGTACATATACTTCTAGCTGATCAATGCATGAGTATTTCCTCTGCTTCAATTACAG
ACGTGGTTGTGCAGGATGTGAATGATGATGATTGGATCACTAGGTACTTCTTCAGTGGAGGTACAATGCCTTCTGCCAATCTCCTCCTTT
ATTTTCAGGATGATGTTTCTGTGGTTAATCATTGGCTGGTTAATGGAAAACACTATGCACAGACAAGTGAAGAATGGCTTAAGAGAATGG
ATGAGAACAAGAGTTCCATAAAGCCAATAATGGAGTCAACTTATGGGAAGGATTCAGCCGTTAAGTGGACTGTCTACTGGAGAACGTTTT
TCCTTTCAGTTGCTGAACTGTTTGGGTACAACAATGGAGAAGAATGGATGGTTGCACATTTCCTCTTCAAGAAGAAATGAATTTGCCAAG
CAAACTGTACCAAGTAATAAGCATGTCAACATGCATTTGCACTATTACCATAAATTAAAGTAGAATGTGTTGCTATCATATATTAATATT
ACTACCATATTTTCTCCCTTACAAAATGACAATCCATGTCTATATATTCAGTCATTTCATGGAATATAGGATTTGTTGTAATTTGGATTG
CAGCCTTACTGTCACACATCATCTTCACATGTAATTCAATCTTAACTCCAAGTTCTTTGAATAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	154	SAM_bind	88
2	26212	SAM_bind GidB Cons_hypoth91 RNA_methylase CMAS Methyltransf_4	5
5	60172	SAM_bind GidB Cons_hypoth91 RNA_methylase CMAS Methyltransf_4	5
1.1	101467	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757)	119
2	123699	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11	4
5	133870	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11	4

Preceding Unigenes (1)

Unigene	Build
SGN-U249218	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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