Sol Genomics Network

Unigene SGN-U273187

Unigene Basic Information

Unigene ID:	SGN-U273187
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273187
mRNA sequence:	Length: 1507 bp

>SGN-U273187 Solanum tuberosum #4 (9 members)
CGAGGTGAGCTTGCCAATTGCTGTTGAAATCGAGGACATTGACAATGGACAAATAGTTGCCAAGGTCATAAGTTTGGAAGAAAGGAGTTT
TGATAGAAAGGTTAGTAATACCATAGTTGCTCTCCCAGATGATGAAATTACTAGTGGCCCTACACTAAAGGCATCTGTAGTGGCCCTTCC
ATTTCCCAGTGAGAAAGAGCCTGTCAAAGAAAGTGTCAAGAGTGTGTTTGAATTGGAATGTGTGCCACTCTGGGGTTCTGTATCTATCTG
TGGAAAGAGACCGGAGATGGAGGATGCTCTTATGGCTGTTCCTAATTTTATGAAAATTCCTATCAAGATGTTTATTGGTGATCGTGTTAT
TGATGGACTAAGTCAAAGTTTGAGTCACCTGACATCTCATTTCTACGGAGTATATGATGGTCATGGAGGATCTCAGGTTGCAGATTATTG
CTGTAAACGTGTTCATCTAGCATTAGTTGAGGAGTTAAAACTTCCCAAACATGATTTGGTGGATGGAAGTGTAAGGGATACCCGGCAGGT
TCAGTGGGAGAAGGTCTTTACTAATTGCTTTCTCAAGGTTGATGATGAAGTTGGAGGAAAGGTGAACATAGATCTTTGTGATGACAACAT
GAATACCTCTAGCTGCACCTCTGAGCCTATTGCCCCAGAAACTGTTGGGTCCACTGCGGTTGTAGCGGTGATTTGTTCATCTCATATTAT
AGTTGCTAACTGTGGGGATTCAAGAGCAGTCCTTTATCGTGGCAAAGAAGCGGTGGCATTGTCAATCGATCACAAACCAAGCAGAGAAGA
TGAGTATGCCAGAATTGAAGCATCTGGTGGTAAGGTCATTCAGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCAATGTCAAGATCTAT
TGGGGACAGATATTTGAAACCATGGATTATACCCGAACCAGAAGTTATGTTTGTACCACGTGCTAGAGAAGATGAATGCCTAGTTTTAGC
CAGTGATGGATTGTGGGATGTGATGACAAACGAGGAAGCTTGTGAAGTGGCTAGACGACGAATTCTGCTGTGGCACAAAAAGAATGGGAC
TAACCCTCTGCCGGAAAGGGGCCAGGGAGTGGATCCTGCTGCACAAGCAGCGGCAGAGTATCTTTCATCTATGGCTCTTCAAAAAGGTAG
CAAAGACAATATATCTGTGATTGTGGTGGACCTTAAAGCTCACAGGAAGTTCAAAAGCAAAAGTTAGAGATTACATGTTCACCCACATTT
GGTTTAGTATAAATCTGTACACGGCGACGGGTATAAATCTCATTATTACATAACTCAGTCCATTCATTTTTCCTATGGGCTTAAGGTGTG
TATGAGAATAGTATTTTAGCAATGTATTATAGAAAAAAACAGTTAACAAACGACGTTTATCCCATTTTTTTGGTGTTTGTTGCGCCAGAA
AATGGCTATGTAAATTGAGCATGTTTTAGCAATATCAGAGGTGCAATTTCTTAGTTAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	22	PP2C-like	349
2	21995	PP2C-like	211
5	56646	PP2C-like	27
1.1	101395	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	322
2	118451	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	125
5	129794	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824) Protein phosphatase 2C - Molecular Function: protein serine/threonine phosphatase activity (GO:0004722) - Biological Process: protein amino acid dephosphorylation (GO:0006470) - Cellular Component: protein serine/threonine phosphatase complex (GO:0008287)	15

Preceding Unigenes (1)

Unigene	Build
SGN-U247923	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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