Sol Genomics Network

Unigene SGN-U273353

Unigene Basic Information

Unigene ID:	SGN-U273353
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273353
mRNA sequence:	Length: 1633 bp

>SGN-U273353 Solanum tuberosum #4 (9 members)
GAATATCCGGTTAAATGTGACGATTAGTGAATCGGATGTAGAGACTGAATGCTCTCACTCTGACTGTTTTGGCTCCGAGGATGAGCTTGA
GACTGCTGATGAGGTTAGAAATGGTGTTAGGGGTATTGTTGGCGGTAAATTGAAGCACTTATTATATTCATCACCTGAAAATTTGATTAA
GGTTAGGGTTAGTGAATCAAAGGACGATAATTTGCCAACGGATGTGAAGTGTGGAATTAAGGGTTTTAGACCACCAAGGCTGGCTCCTCC
AGCGACAGACGTGGACGATTTCACATCTGCTTGGGATTTTATCAAAAGTTTTGGTCCTGCCGATGATGAAGATATGGTTTCACCGTTACC
TGATGAGAGCACTTCTGATGACATACTTGTAAACGAGCAAGCAGAAGAGATTGCTAAGAACGAAGAGCGTAGAGAGGATTTTGTAAGAAA
TGCTTCACAAGTATCAGAGTCTTCTTCGGAAATATCCACTGATAGAGATAACGACTCCTCAGTCTCGAGGACAGAAAATGATGGAGCTTG
TGAAAAGCCATTCGAGCAAGGTGTAAGAGATGCTGCTGAAAGTTCTAAATTACCTAGTGGTGATTCCTACAGCCTGATATCAAAGACAAG
CTCCAAGTCACCCACCGGTGAATCCGATGACGTTATCTCGGAGATGAGCTCTAAGTCACTGAGTGGTGATTCATATGCATTGATTTTGAA
GCCTGTACATTCTGTTTCTCCAAATGGTTCCCCCAGTATAAAATCTTGGCAGAAGGGCGACTTTCTTGGGAGTGGGTCATTTGGAACAGT
GTATGAAGGCTTTACCGATGATGGATTCTTTTTTGCCGTCAAAGAAGTTTCGTTGATTGACCCAGGAAACCAACAAAGCCTTTTTCAACT
TGAACAGGAGATTTCTCTTCTAAGTCGTTTTCGACATAGAAATATAGTTCGCTATCATGGCACAAACAAGGACGAGAGCAAACTGTATAT
CTTTCTTGAGCTTGTTACAAAAGGTTCACTTGCTAGTGTCTATCGCAAGTATCGCTTGCGTGATTCCCATGTTTCAGATTACACCAGGCA
AATCTTGAGTGGGTTGCATTATCTTCATTCCAGAGAAGTGATGCACAGGGACATTAAGTGTGCCAATATATTGGTGGATGCTAATGGTTC
AGTGAAGCTTGCAGATTTTGGACTGGCAAAGGCAACACAATTGAATAACATCAAGTCTTGCAAAGGAACTGCATTCTGGATGGCCCCAGA
GGTTGTTAATAGGAAGAGCAATGGATATGGAACTCCTGCTGATATATGGAGTTTGGGTTGCACTGTCTTAGAGATGTTAACTGGACAAAT
TCCTTATTCTCACTTGGAAGGGATGCAAGCACTGTTCAGGATAGGCAGAGGTGAACCTCCTCCTATACCAGATACCTTATCGACAGAAGC
TCAGGATTTCATAAAAAGCTGTTTGCGAGTTAATCCGAATGATCGGCCAACTGCAGCTGAACTACTAGAACATCCATTTGTTATGAAGCC
ACCATCAAATTTCTCAGGTCCTTTAGCACCATAAATTCTGCTGTCAATTGTACTGAGTGTACTCTTAAGTCTCCAAGCCTCTTGCTTTCT
CAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	3
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	57567	Prot_kinase	12
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	138399		2

Preceding Unigenes (2)

Unigene	Build
SGN-U252247	Solanum tuberosum #3
SGN-U256838	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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