Sol Genomics Network

Unigene SGN-U273458

Unigene Basic Information

Unigene ID:	SGN-U273458
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273458
mRNA sequence:	Length: 1389 bp

>SGN-U273458 Solanum tuberosum #4 (8 members)
TCTGTTTTTGCTTTTACATCTCTCTTCCTTTCTTTCTTCTTCTCTCAACTACAAAAAATCATGCAATTAATGGAACTATGCTGAGCTACT
TTATGGCTTTTTGACCTGACAAATCTTCCTTGCGCATCAATTTATTTGTGTTGTCATGTTAATTAGGTCCTTATGATGTCAAGATTCGAA
TTAAAGCTGTTGGTATATGTGGAAGTGATATCCATCACTTTAAGGTAAGTTTCGACTGAATAATAGTCAAAACAAAAATTCTAATCGCTT
GAACCTGGTCTCCCATGACTTGATTGATTACTCAGCCGCACACGCCCTTAAGATTAATTGTTAAGGTACGATTACTGCGTTGTAACGTTA
GTTTCAACATGACTCTCCAGAATATGAGAGTAGCTAATTTCGTGGTTAAAAAGCCAATGGTACTTGGCCATGAGTGTGCTGGAATTGTAG
AACAAGTTGGTAGCCAAGTGAAGTTTCTGATGATCGGTGATCGTGTAGCTTTGGAACCTGGTATTAGTTGCAGGCAGTGTCAACTATGCA
AAGACGGTCGCTACAATCTCTGCCGTAAAATGAAGTTCTTTGGCTCTCCTCCAACAAATGGTGCTTTAGCCAACCAGGTGGTGCATCCTG
CAGATCTATGTTTTAAGTTACCTGATAATGTAAGCTTGGAGGAAGGTGCAATATGTGAACCTTTGAGTGTTGGTGTCCATGCTTGCCGCC
GTGCCAATGTAGGTCCTGACACCAAACTAATCATCATAGGTGCGGGACCTATTGGCCTGGTCACTATGCTGGCAGCTCGTGCTTTTGGAT
CACCCAAGATAGTCATCGTTGATGTGGATGATTGTCGTTTATCTTTCGCGAAAGACCTGGGTGCTGATGAGATCATTAAAGTTTCTTCCA
TTATGCAGGATGTGGAGGAGGAAGTGGTGCGAATACGTAATGCAATGGGTGGTCCTGTGGATTTGAGCTTTGATTGTGTTGGTTTTAACA
AGACTATGACAACGGCTCTACAAGCCACCCGCGCTGGTGGTAAAGTATGCCTCGTTGGATTAGGCCAGAGTGAGATGACTCTCCCTCTTA
CTTCAGCTGCAGCAAGGGAGGTGGATGTCATAGGCATTTTCAGATACCGAAATACATGGCCGCTCTGCATTGAACTTCTGAGAACTGGGG
AAATAGATGTGAAGCCTCTCATAACCCACAGGTATAACTTTACTCAACAGGGTGTGGATGAAGCCTTTGAGACCAGTTCTCGCGGCGGAA
ATGCCATCAAGGTCATGTTCAACCTGTAGCTGAATAGAAATTTCTGGCAGTGTGCCTAAACTCAAAATTGGTACATGATGTTTTGTGAGA
ATGAATATTCCTTACCCCCTCCAAAATAGAACTTGAATG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	100	Tdh Adh_zn_family	127
2	24327	NAD_BS Tdh ADH_zinc DUF258 Adh_zn_family BchB SapB_2	8
5	58381	NAD_BS Tdh ADH_zinc DUF258 Adh_zn_family BchB SapB_2	8
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	122739	GroES-related - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor (GO:0016616) - Molecular Function: NAD binding (GO:0051287) Alcohol dehydrogenase GroES-like Alcohol dehydrogenase zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) NAD-binding site Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5
5	132925	GroES-related - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor (GO:0016616) - Molecular Function: NAD binding (GO:0051287) Alcohol dehydrogenase GroES-like Alcohol dehydrogenase zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) NAD-binding site Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5

Preceding Unigenes (1)

Unigene	Build
SGN-U248425	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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