Sol Genomics Network

Unigene SGN-U273846

Unigene Basic Information

Unigene ID:	SGN-U273846
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273846
mRNA sequence:	Length: 2198 bp

>SGN-U273846 Solanum tuberosum #4 (8 members)
ATTCTCTCTCTCAAAACCCTCCAATGAATTTCTAGTGAGAGAAAGAGAAAGAAGAAAACTCCGATTACATAAACACTGCGGCCTTGTTGG
CTACAAATCGGAGCAATGAAAGTATCTAATGGAAACTGTAGTTGTGCAGTGGAAAGAGACGATAGTAATACTACTACAACTAGTAGTGTC
AACGATAGTAATACTACGACTGGTAGTCTCAGTATTAGTGGTGATGACGGCGCCGGAGAAGTGGGTGGAAGGGTGGTGGCAGTGGTGGGA
GTGAAGTTAGATTCCAGAAGTAAAGAGTTGCTTACTTGGGCTTTGGTTAAGGTTGCTCAGACTGGAGATCATGTAGTGGCTGTACATGTT
ATCGATCCAAATTCTGATAAATCAGAACCTCTTTCACTGGTGAAGTCATTTGACTTGATGCTGGCTGCTTATGAGGGCTTCTGCAATTTA
AAGCAGGTGCATTTGAAGCTTAAAGTCTGTCGAGGATCACCAGTTCGTAAAGTTCTTGCTCGCGAGGCGAAATTGGAAAGTGCTATAAAT
TTGATTATTGGGACTTCAGGCAGTCATCATGCCATTCGGTCGTCAGTGTCACTTGCAAAATACTGTGCTAGGAAAGTGACAAAGAGCATC
TCTGTTATTGCCGTTGACAATGGCAAGATTGTTTATCAAAGGGAAGCTAGTGCTTTGGATGGAGATGAATCTAGTGACTCAGATGTGCCC
AAATCAAGATTCAAGAGGAGGAAGACACTGAACAAAAGTCCTCTGAGCTTAATGCCTAAGAAAGCTGTGGAAGAAAACTCTTGTACAACA
GAGAACAATTACATGGCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGACACTGCTTCGACGAGTTTTTCTT
CAGAACATAGTGGCACCTGATAAATTTCCCGCAAAAAGGTCTTCTGTGATGCATTGGGTTTGGAAACGACCAAGTCGGCAATCTTTTGCA
GCTATCTACCCTGATCATAAACAGAGTGTATCTGACAAGGATGAGCCTCATTGTACAAACTTGGATGAAGGGAAGGGGGCAATTATTCCT
GTCGGAAGTGATGCTGATCCAATTTCAAATGAATGCTTTATTGTCCTTCCTGAGGAACTGGAGGGTCTTACTGAAAGGTACTCATCAATG
TGCAGATTGTTCAATTACCAGGAGCTTTGTTCAGCAACATCTGATTTCCTGCCAGAGAATTTGATTGGAAAAGGAGGCAGCAGTAAGGTT
TACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTGTGAAAATATTGAAGCCATCAGAAGCTGTGGCACAGCAATTCCGTTCAGAGATA
GAGATACTCACAACTCTGCATCACAAGCACATTATATCACTGATTGGGTTTTGTTTAGAGGAGAACAACCTTTTACTGGTTTATGATCTG
TTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTTCCAAAAAGGATGAAAATTCATTTAGCTGGGCAGATAGATACAAGGTTTCTTTG
GGTGTTGCTGAGGCACTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGAAATCTTCAAACATTCTCCTGTCC
GATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTGCAACACCGGCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGA
ACATTTGGGTAACTTATTTTTTCAGTTTGAGTTCAAATAAAATTTGTCTACATCACTTCATCAACAAAAAAAAAGCCTTTGTCAGTTCAT
ACACTGATATTCATATTGGCAGCTACTTGGCTCCTGAGTACTTTATGCATGGAAAGATAACTGAAAAGGATTGACGTGTATGCAATTTGG
TGTTGGTTCTCCTTGAGCTTTTTGTCTGGTAAAAAGCCAATTGATAATGGCAATGGGAAAGGTCAGGAAAGCTTAGTCATGTGGGCGAAA
CCAAGTTCTGAAGGGTGGGAACACGGAAGGAGTTGCTAGATCCGAGCTTGATTGACACTTATGATCATGATCAACTTTGAGAGAATGGTC
TCGGCGGCATCACTGTGCATCAGACGAGCTCCTGGAATTAGACCTCAAGATTGACATCGTGAGTGAACTTTGTCAGCCACTCAAGTTGAG
GTTATTTTGGTACCTAAATATGTTGCCACTTTGCATTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21970	Prot_kinase	1313
5	56255	Prot_kinase	690
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	132440	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) UspA - Biological Process: response to stress (GO:0006950) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U247630	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer