Sol Genomics Network

Unigene SGN-U274086

Unigene Basic Information

Unigene ID:	SGN-U274086
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	274086
mRNA sequence:	Length: 765 bp

>SGN-U274086 Solanum tuberosum #4 (7 members)
AAGGATTTGTACCCAAATCAATTTCAGGGTTAACAAATTCCCAATTCGAATTTTCAGCAACAATGGCAGTCAAAGGGAGGCATTTCCGAG
GTTTATCTCGGAAATCGTCTAATTCTACGCTGCTTTTTGCTGTGTTTATTGGGTTTTCATTTTTCGTGCTGATTCTTCTCGCTTTTGGAA
TTTTCTCGATTCCTTTCACTTCTAGAGGATCGCGAAAAGTACATGATCTTAGCTCAATTGCTCACAATGCAGCTGGAAGATGAGATGATG
ATGGTGGAAGAGGAGATCAGTGGGCTGAATTGATTTCATGGGAACCAAGAGCTGTCGTCTACCATAATTTCTTGTCAAAGGAAGAATGTG
AATATCTGATTAATCTTGGAAAGCCTCATATGAAGAAGTCAACTGTCGTTGATAGTGCTACTGGCAAGAGTACAGACAGCAGGGTTCGAA
CAAGTTCGGGAACATTTCTTGCCAGGGGACAAGATAAAGTAGTCAGGACTATAGAGAAAAGGATTGCAGATTTCACCTTTATACCCGTAG
AGCATGGTGAAGGTCTTCAAATTCTCCACTATGAAGTGGGTCAAAAGTATGAGCCACACTATGATTACTTTTCGGATGAGTTTAATACTC
AAAATGGTGGTCAACGCATTGCTACGGTTTTGATGTACTTATCAGATGTTGAAGAAGGGGGAGAAACTGTATTTCCTGCTGCCCAGGGAA
ATTTTAGTGCAGTTCCTTTGGTGAAATGAGCTATCTGAATGTTGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	364	2OG-FeII_Oxy	46
2	22200	2OG-FeII_Oxy	46
5	56441	2OG-FeII_Oxy	42
1.1	101726	Prolyl 4-hydroxylase alpha subunit - Molecular Function: oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen 2-oxoglutarate as one donor and incorporation of one atom each of oxygen into both donors (GO:0016706) - Biological Process: protein metabolism (GO:0019538)	43
2	118645	Prolyl 4-hydroxylase alpha subunit - Molecular Function: oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen 2-oxoglutarate as one donor and incorporation of one atom each of oxygen into both donors (GO:0016706) - Biological Process: protein metabolism (GO:0019538)	40
5	129157	Prolyl 4-hydroxylase alpha subunit - Molecular Function: oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen 2-oxoglutarate as one donor and incorporation of one atom each of oxygen into both donors (GO:0016706) - Biological Process: protein metabolism (GO:0019538)	35

Preceding Unigenes (1)

Unigene	Build
SGN-U248480	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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