Sol Genomics Network

Unigene SGN-U274642

Unigene Basic Information

Unigene ID:	SGN-U274642
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	274642
mRNA sequence:	Length: 1610 bp

>SGN-U274642 Solanum tuberosum #4 (7 members)
CAACTAGTCATGTCTATGCCATGAAAAAGCTAAAGAAGTCAGAAATGCTTCGTAGAGGCCAGGTTGAACATGTTAAAGCCGAAAGGAATC
TGCTTGCTGAAGTGGAGAGCAATTGCATTGTTAAGCTATATTGCTCTTTCCAAGATGAGGAGTATCTTTACCTTATAATGGAATATCTTC
CTGGTGGAGATATGATGACTTTGCTGATGCGTAAGGATACTTTAACAGAAGATGAGGCCAGGTTTTATGTGGGGGAGACCGTCCTTGCTA
TAGAATCTATCCATAAACACAATTATATTCACAGAGATATCAAGCCTGATAACTTACTACTTGATAAACATGGACACATGAAGTTATCAG
ATTTTGGATTGTGTAAACCGCTGGACTGCAGTAATCTTCAGGAAAAGGATTTCACAGCGGCAAATAAGTTAAGTGGCGCTCTTCTAAGCG
ACGGACGCCCAGCCCCTCCAAGGCGCACTCAACAGGAGCAACTGTTGCATTGGCAGAAGAATAGGAGGATGCTTGCTTATTCCACTGTTG
GGACACCTGATTACATTGCTCCAGAGGTTTTATTGAAGAAAGGATATGGATGTGAATGTGATTGGTGGTCACTTGGTGCGATCATGTATG
AAATGCTCGTGGGATACCCACCATTCTATTCTGATGAACCTATGTCCACCTGTAGAAAGATAGTAAATTGGCGGACTCATCTTAAATTTC
CTGAAGAGGCAAAACTGTCTCCAGAAGCAAAAGATCTCATATGTAAGCTCTTGTGTAATGTAGAGCAGAGACTTGGGACCAGAGGTGCTG
ATGAAATAAAGGCTCACCCATGGTTCAAAGGCGTTGAATGGGATAAACTTTATCAAATGAAAGCTGCATTTATTCCAGAAGTTAATGGCG
AGTTGGATACTCAGAAATTTTGAGAAGTTTGAAGAGGGCGACAATCAAATTCCAACAGCAGCAAAATCAGGTCCATGGAGGAAGATGCTC
TCCTCAAAGGATGTCAACTTTATGGGTTACACTTATAAAAACTTTGAGATTGTGAATGATAATGATGTTTCTCAAATGGCTGAATTGAAG
AAGAAGAGCAACAAAGCTAAGAGGCCAACTGTGAAGTCACTTTTCAGTGAGGATTCAGAAGCCACCGACTCTCAACAGGCTCATGGAAGT
TTCCTTAATCTCTTACCTCCACACTTGGAATCCTCAAAGCAGGCTGAACAACTATAGCTACATCCAATACTAATCTGTTAATAACTTCAT
GACCATAGCCAAACCAAAGCAAACAGGGGCAACACAAACCCCTCGTCAAGTCAATAGCTTTCGTTGTTGTGTTTTTTAACCTAGGTGTGT
TCCAAGTGTAAGTAAAGTATTCACGACGAAGGCAGTTTTGCAAATTCTGGTGTAACTGCCTTGGTTCATAGTTTGCGCTTGTTTTGTGTA
AATTATTTCTTGGAAGTACATATATCATTCTTTTTGTTGCTAGTTTGTAATTTTGCTTACTCTCTAAGCTGCAGAAACTTGTGACCTTCT
TCTTGTAATCTCTTCAACTTTGGGTTTCTTTATTTCAATAGCCCCATTCTCTAAAGATGAAGGTACTTGCGGGTTTTTTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	22022	Prot_kinase	135
5	56564	Prot_kinase Ser_thr_pkin_AS	32
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118461	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	115
5	129249	Protein kinase-like Protein kinase C-terminal - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	28

Preceding Unigenes (1)

Unigene	Build
SGN-U246019	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
End Date:
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