Sol Genomics Network

Unigene SGN-U275053

Unigene Basic Information

Unigene ID:	SGN-U275053
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275053
mRNA sequence:	Length: 1715 bp

>SGN-U275053 Solanum tuberosum #4 (6 members)
CACATGCATACATTATACATACGTACTGCTCCCGCCCATCTTCCTTAAAATCTCCGGCAGGAACAGAAATTCTCAATCTTTTAACCACCA
TTGTTCTTGATTCTTGAATTTATAACTATGTTTTATGTCTAAGGTTTTGTTGTAATAATCACCATGGGTGCTTGTACCTCAAAACCTCCA
AGACCCAATCCTTATTCCCCACAAGAAATTCTTCCCCCACCGGAAACACCAAACGTCGCTGAAACCCAGAAAGAAAATGAAGCTAAAAAA
TCACCTTTTTTCCCATTTTACTCTCCCAGTCCTGCTCGTTTTTTTCTGTCCAAGAAATCACCTGCCCGTCAGTCTTCTGCTTCTAAGAGT
GCGAATTCTACTCCGGCGAGGTTGTTTAAACGACCTTTTCCTCCTCCTTCTCCGGCGAAGCATATTAAAGCTCTGCTTTTGAGACGGCAT
GGTAGTGTTAAGCCTAATGCTGCAGCTATTCCGGAAGGAGAGGAAACTGAGGGGGCTAACTTGGATAAGAGTTTTGGGTTTTCTAAGCAA
TTTGCGAGTAGGTATGAAATTGGGGAGGAAGTGGGTAGAGGCCATTTTGGGTATACTTGTTCTGCTATTGTCAAGAAAGGTGAACTTAAG
GGTCAGAAAGTGGCTGTTAAGGTCATTCCAAAAGCCAAGATGACAACAGCTATTTCCATTGAGGATGTCAGAAGGGAAGTTAAAATTTTG
CGCGCCTTAACAGGACATAACAATCTCATACAATTCCATGAAGCATTTGAAGATCGGGATAATGTCTACATAGTGATGGAGTTATGCCAA
GGAGGAGAGCTCCTTGATAGAATTCTTGCACGGGGTGGGAAGTACTCAGAAGAGGATGCAAAGGATGTCATGGTACAAATATTAAATGTT
GTTGCATTCTGCCATCTCCAGGGTGTTGTGCACCGTGATCTTAAACCCGAGAATTTTTTGTTTTTGTCGAAAGATGAATCCTCCCCGTTA
AAAGCCATAGATTTTGGCTTATCAGATTTTGTCAGACCAGATGAAAAGCTTAATGACATTGTTGGAAGTGCATATTACGTAGCACCAGAA
GTTCTGCACAGATCATATGGTATAGAGGCTGATGTGTGGAGTATAGGTGTAATATCATATATTCTTCTGTGTGGTAGTCGTCCTTTTTGG
GCTCGCACAGAGTCTGGAATCTTCAGGGCTGTTTTAAAGGCTGATCCAACTTATGATGAAGCACCTTGGCCTACGTTAACTTCAGAGGCT
AAAGATTTTGTCAAGCGACTATTGAATAAAGATCCTAGAAAAAGAATGAGTGCTGCTCAAGCATTATGTCATCCTTGGATGCGTAATCAT
AGTGGTGCAAAACTACCGCTTGATATTCTTATTTTTCGACTCGTGAAGGCATATATGCGGTCATCCTCTTTGCGTAAGGCTGCTTTAAGG
GCGTTGTCGAAAACTTTGACAGCAGATGAACTGTTCTATCTAAAAGAACAATTTGCATTGATGGAGCCAGACAAAAATGGCAACATAAAG
CTAGAAAATATAAGATCAGCACTAATGAAATATGGAACAGATGCTATGAAGGAGTCTCGGATTCCAGATTTTCTTGCCTCGCTAAATGCA
CTTCAATATAGAAAGATGGATTTTGAAGAATTCTGCGCAGCCGCCTTAAGTGTTCATAGTTGTAGAGGCTCTCGAGGGGGGGCCCGGTAC
CCAAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	56274	Prot_kinase	178
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128946	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	159

Preceding Unigenes (2)

Unigene	Build
SGN-U253700	Solanum tuberosum #3
SGN-U254954	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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