Sol Genomics Network

Unigene SGN-U275126

Unigene Basic Information

Unigene ID:	SGN-U275126
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275126
mRNA sequence:	Length: 1213 bp

>SGN-U275126 Solanum tuberosum #4 (3 members)
TGCAACTGCAGTTGTTACAGAGTTCACTTCTCTTTCAGGGACAATGGCACGCCACTATGCACTAAGAGATGGCCATTCAAAGGAGATTGC
AGAGGCATTGTTTGAGATCTTACTTCCACGATTTTCTGGAGATATGCTCCCAAAAACTGAAGTTGGGTCTGTTTTGGCTATTACTGATAG
GCTTGATAGCATTGTTGGCTTATTTGCTGCTGGCTGTCAGCCAAGCTCAAGTAATGATCCATTTGGCCTGCGACGGATCTCCTACGGTCT
TGTGCAACTCTTGGTTGAAATTGACAGAAATGTGGACTTACGACAGGCTTTAGAACTTGCTGCTGCAGTGCAACCCATTGAAGTTGATGT
CAGTACAATCAATGATGTACATCAATTTGTAACGCGCAGACTAGAACAATTTCTGATGGACAAAGGTATAAGCCCAGAAGTCGTTAGGTC
TGTTCTTTCCGAGCGTGCAAGACGACCTGGTTTGGCGACTAAGTCAGTGTACAAAATGGAGTCCTTGTCCAAAGGGGAGCTTTTGCCTAA
GGTTGTTGAAGCATATTCACGTCCAACAAGAATTGTTCGCGGGAAGGATTCCAATGTTGATGTGGAGGTGGATGATCAAGCTTTTGAAAC
AAATGAAGAGAAAGCTTTGTGGAACACTTACTTGTCACTAAAAAGTAAAATACATCCAGACATGGAAGTTGATGATTTTGTTGAAGCATC
ATCAGTACTTGTAGAACCGCTGGAGAATTTTTTCAACGAGGTCTTTGTAATGGTGGAAGACGAACGGGTAAGAACAAATCGTCTTGCACT
GCTGAAGAAAATAGCAGACTTGCCAAGGGGAATAGTAGATCTCTCAGTTTTACCGGGATTTTGAAGTATGTACCAGTGTCCGCTTAGTTT
GTGCCATACTATCAGCTGAGGCATCAAAGAAGAACAGCTATTGCCCATTAGCGGAGGAGAAAACAGTAAACAGACTAATTTTTTTTCCGC
AGAGGGGAAGGGATACGACCACAACAGAGCGAACTAGAGGAGAAACTGTTACACAAATTTCGTAACGATGTCACAATTTTGACTGTTGTA
CAAGTGAATGAATAAAATGAGCTATCGCTTGTATGCTCACATTGTCTGAGGAATATATTATTTTGTTTCAAGTTATTCAAAAAATTCACC
TTTGATGAAAAAAAAAAGTGAAAAAAAACTCGAGGGGGGGCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	3

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2117	tRNA_synt_2f ANK tRNA_synt_2e Fmet_deformylase tRNA_synt_Gly HD tRNA-synt_1d_C	9
2	25168	tRNA_synt_2f ANK tRNA_synt_2e Fmet_deformylase tRNA_synt_Gly HD tRNA-synt_1d_C	7
5	59172	tRNA_synt_2f ANK tRNA_synt_2e Fmet_deformylase tRNA_synt_Gly HD tRNA-synt_1d_C	7
1.1	103585	Glycyl-tRNA synthetase beta subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) t-snare Heterodimeric glycyl-transfer RNA synthetase - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) Glycyl-tRNA synthetase alpha subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) Aminoacyl-tRNA synthetase class 1a anticodon-binding	6
2	122488	Glycyl-tRNA synthetase beta subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) Aminoacyl-tRNA synthetase class 1a anticodon-binding Heterodimeric glycyl-transfer RNA synthetase - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) t-snare Glycyl-tRNA synthetase alpha subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426)	5
5	132682	Glycyl-tRNA synthetase beta subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) Aminoacyl-tRNA synthetase class 1a anticodon-binding Heterodimeric glycyl-transfer RNA synthetase - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426) t-snare Glycyl-tRNA synthetase alpha subunit - Molecular Function: glycine-tRNA ligase activity (GO:0004820) - Molecular Function: ATP binding (GO:0005524) - Biological Process: glycyl-tRNA aminoacylation (GO:0006426)	5

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U247788	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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