Sol Genomics Network

Unigene SGN-U275595

Unigene Basic Information

Unigene ID:	SGN-U275595
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275595
mRNA sequence:	Length: 1183 bp

>SGN-U275595 Solanum tuberosum #4 (6 members)
GGATGAAGCATCAGGTGTTGGGAATTTGAGGCATAAAAGGCTGGCAAATTTGATTGGGTACTGCTCTGATGGGGATGAGAGGTTGCTTGT
AGCTGATGAAAAATAGCAGGGATGGTAAGAGTTATAGCACGAACCTTGCGTATACACCTCCTGAGTATTTAAGAAATGGAAGAGTCACTC
AAGAAAGTGTTGTTTTCAGCTATGGAACTGTCCTTTTGGACTTGCTAAGTGGAAAACATATTCCTCCTGGTCATGCACTCGATATGATAC
GGGGAAAAAACATTCTTCTATTAATGGATTCACATTTGGAGGGAAATTTCTCTACAGAAGAGGCAACTGTTGTATTTGATCTGGCTTCAC
GATGCTTACAGTATGAACCCAGGGAGCGACCAAATACCAAAGACCTCGTTTCAACACTTGGTCCTTTGCAAAGTAAACCTGATGTTGCAT
CTCATGTAATGTTGGGTATTCCTAAGAGTGAGGAAGCTCCACCAACTCCACAGCACCCTCTTTCTGCAATGGGTGATGCTTGTTCGAGAA
TGGATCTCACAGCTATTCATCAGATTTTGGTAATGACACATTATAAAGACGATGAAGGGACAAATGAGTTGTCTTTCCAAGAGTGGACTC
AACAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACTTGGCATTTCGGGACAAGGACTTTAAAACTGCCATAGATTGCTATTCTC
AGTTTGTAGATGTGGGAACGATGGTGTCTCCAACTGTTTATGCACGAAGAAGCCTTTGTTATCTCATGTGTGATCAACCAGATGCTGCCC
TTAGAGATGCAATGCAAGCACAATGTGTTTACCCAGACTGGTCAACTGCATTTTACATGCAGGCAGTTGCCCTATCCAAGCTAGACATGC
ACAAAGATGCAGCTGACATGTTGAATGAGGCTGCAATTCTAGAAGAGAAAAGACGCGGTGGACGTGCATCTTGATAATACCCTCTCTTGT
ATCATTCTTTTGGTTCTATCAGTTATTCTTGTCATCACAAAATTAGCCCAAATTTCTGTATCATTTGTTTTGAGTGTGATTGTCTTAGAA
CTATGTATAACAAAGGAAGAGAGTCATAAACTCTGTTGGTATATGCGCATGTCAGTTTTGCACTCTGATTTGTCAAAATAGAAGATTAAA
ATTTCTCAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	22206	Prot_kinase	45
5	56423	Prot_kinase	44
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118620	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	42
5	129097	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	41

Preceding Unigenes (1)

Unigene	Build
SGN-U248620	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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