Sol Genomics Network

Unigene SGN-U275627

Unigene Basic Information

Unigene ID:	SGN-U275627
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275627
mRNA sequence:	Length: 1506 bp

>SGN-U275627 Solanum tuberosum #4 (6 members)
CTTCCCCGTAAAGGCAGAAGTGACAGAAAAAGAATCAACTGGTCCAGAACTAATGGGTGATGCTACTGATGATCAAGGACTGAAATTAAA
TGAGTCCCCTACTATGGAACCAGGAAATTTGAATGACAGGACCAATGAGCAGAAAGATGTTTCCGTTTCTGACTCTTCAGCTTCTGTGAA
CCATACCGGAATTTCAGTAAGGGGTAGAGTGACTGCAGATGATGAAATGTCTAAATCATCAGAAGCGTTGCCGTCTGACAATCATGAGAA
GGTCTCGAAGGTTTCTCAAGATGCAGGAGTTGGAGTTGAGAAAGTTGTAGAGAAGGAATCAGTGTCAGTTGTTGTAAAGGACCTGAAACA
AAGTGTTCCTAGGGTTAGGGAACCTGAAACCAGATCTGCAACGGAGCACCCATCATCTTCCAATGCATCTGCAACTCGGATACCGGCACC
TGCCGGCCTTGGTCGTGCTGCCCCACTATTGGAACCTGCTCCCCGAGTGGTTCAGCAGCCTCGTGTAAATGGAACAGCATCTCCTGCACA
AAACCAGCTTGTTGAAGAATCTACAAATGGAGAGGCTGATGAATATGATGAGACACGTGAGAAGCTCCAGATGATAAGAGTCAAGTTTTT
GCGTCTAGCTCATAGGAATGGACAGACTCCACATAATGTTGTTGTTGCCCAAGTCTTGTATAGATTGGGATTGGCTGAACAGCTGCGGGG
GAGAAGTGGAGGTCGTGTTGGTGCTTTTAGTTTTGATCGTGCAAGTGCTATGGCTGAGCAACTTGAGGCAGCTGGACAAGAACCCCTGGA
CTTCTCTTGCACAATAATGGTTCTTGGAAAAACTGGTGTTGGTAAAAGTGCAACCATAAATTCGATATTTGATGAAGTTAAGTTTGACAC
TGATGCTTTCCAGATAGGGACAAAAAAGGTTCAGGATGTTGTTGGCACTGTGCAGGGAATCAAGGTTCGGGTGATTGACACTCCTGGGCT
TCTTCCTTCCTGGTCAGACCAGCGCCAGAATGAGAAGATCCTTCATTCTGTCAAACGGTTTATTAAGAAGACACCCCCAGATATTGTTCT
GTATCTTGACAGGTTGGATATGCAGAGCAGAGATAATGGTGATATGCCATTGTTGAGGACAATTACTGAAATTTTTGGACCATCAATATG
GTTTAATGCCATAGTTGTTCTGACACATGCTGCGTCTGCTCCACCTGAAGGCCCCAATGGTACTGTAACAAGCTATGACATGTTTGTAAC
TCAGCGCTCTCATGTTGTCCAGCAAGCAATACGTCAGGCTGCTGGAGATATGCGCCTTATGAATCCTGTTTCGCTAGTTGAGAATCACTC
AGCATGTAGGACTAACAGGGCTGGACAGAGGGTGCTGCCTAATGGACAGGTTTGGAGGCCTCACTTGTTACTTCTGTCATTTGCATCAAA
AATTTTGGCTGAAGCAAATACATTGCTTAAATTACAAGATAGTAACCGCACCAAGGACAGCCCTTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	266	AIG1	58
2	22732	Toc86_159 MMR_HSR1 AIG1 Toc34	21
5	56990	Toc86_159 MMR_HSR1 AIG1 Toc34	19
1.1	101460	AIG1 - Molecular Function: GTP binding (GO:0005525)	130
2	119002	Chloroplast protein import component Toc86/159 - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: chloroplast outer membrane (GO:0009707) - Molecular Function: protein translocase activity (GO:0015450) AIG1 - Molecular Function: GTP binding (GO:0005525)	23
5	129541	Chloroplast protein import component Toc86/159 - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: chloroplast outer membrane (GO:0009707) - Molecular Function: protein translocase activity (GO:0015450) AIG1 - Molecular Function: GTP binding (GO:0005525)	19

Preceding Unigenes (2)

Unigene	Build
SGN-U255963	Solanum tuberosum #3
SGN-U257626	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer