Sol Genomics Network

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Unigene SGN-U275865

Unigene Basic Information

Unigene ID:	SGN-U275865
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275865
mRNA sequence:	Length: 1284 bp

>SGN-U275865 Solanum tuberosum #4 (5 members)
TGGTGTTGGAGGGGGTAATAAGGATAAAGGTAAAGCTGAGGCTGTTGTAAATGATGGAAAAAGTTTGGTGTTTTTTGGGAAAATGGCTAA
AAATTTCAATTTGGATGATTTGTTGAAAGCTTCTGCTGAAGTTTTGGGAAAAGGGACATTTGGTACTGCTTATAAAGCTGCTTTGGAATC
AGGGATTACATTAGTTGTGAAGAGATTGAGAGATGTTACTGTACCTGAGAAGGAGTTTAGAGAGAAAATTGAAGATGTTGGGAAAATGAA
TCATGAGAATTTGGTTCCTTTGAGAGCTTATTATTATAGCAGAGATGAGAAGCTTCTTGTTTATGATTACATCTCAATGGGAAGCCTTTC
TGCACTTTTACATGGCAACAAAGGAGCAGGTAGGACACCGTTGAATTGGGAAACAAGGGCTGGCATTGCCCTTGGAGCTGCACACGGGAT
TGCCTACCTTCATGCACAAGGGCCCTCAGTATCACATGGCAACATTAAGTCATCTAATATCCTCCTCACCAAATCATACGAGGCCCGTGT
TTCAGATTTTGGCCTTGCTCAACTCGTCGGTCCATCATCAACTCCCAACCGTGTTGCAGGTTACAGGGCACCAGAGGTAACTGACCCTCG
TAAAGTCTCCCAGAAAGCAGATGTCTACAGCTTTGGTGTCTTGTTGTTGGAACTTCTAACAGGGAAGGCTCCCACACATTCGGTACTGAA
TGAGGAAGGTGTCGACCTACCAAGATGGGTGCAATCAGTGGTACGAGAGGAATGGACAGCCGAAGTCTTTGACCTTGAGCTCCTTAGGTA
CCAAAACGTCGAAGAGGACATGGTCCAGCTATTGCAAGTTGCAGTTGATTGCACTGCTCAGTACCCGGACAGACGCCCTTCAATGGCCGA
GGTCACTACTCGCGTTGAAGAACTCTGTCGTATGGATTCTGGAGGTGGTGACATAATTGACAATGATGCAGAAGTGCAAACTGCATGAAA
TTGAACAAGAAAAAATAGTTCCATCACATTATTTCAAATTTTTTCTTTTTCGTTTTCGATTGAGCATTTCGATTACTTTGTTCATTCTTG
GAGTTCTTCAGTGAAGATAAATTGTTCATTTTTATTTTTTTTTTGAATTTATTTTCCAGTAGCAACAGAGTTTTATTAAAGATCTGGTTG
GTAGTTGAAATGGAGCTGTTTTTTTTTTAATAGATATTGATGTATTCTTTTTTGAAGGTGTGATGGGCTGTATAAATAATTGAGATGACC
TGTAGTTACAACTCATTGCATTAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
prk2	receptor-like protein kinase 2	protein kinase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21971	LRR	768
5	56254	LRR	702
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128926	Leucine-rich repeat	647

Preceding Unigenes (2)

Unigene	Build
SGN-U252604	Solanum tuberosum #3
SGN-U266232	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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