Sol Genomics Network

Unigene SGN-U275955

Unigene Basic Information

Unigene ID:	SGN-U275955
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275955
mRNA sequence:	Length: 1209 bp

>SGN-U275955 Solanum tuberosum #4 (5 members)
AAGAAGAAGAAGAAGAAGATGGAAGGAGAATCAAGCAGTATTCAAGTCAATGGAATGCAATTCTCATATGATTTTCAAAGTCCCATCTAT
TTCGATTTCAATCTCAACATTGCCCCCAGATCTCGCTGTCTCCTTCTCGGTGCAAATGGATCAGGGAAAACGACCCTTTTGAAGATATTG
GCGGGAAAACATATGGTCGGTGGAAAAGATGTAGTCAGGGTGCTGAATTTTTCGGCTTTTCATGATACCCACCTTGTTTGTAGTGGTGAT
CTGGCTTACCTTGGAGAGTCTTGGAGCAAAAATGTTGGTGCTGTTGGAGAGATTCCACTTCAGGGAGATTTTTCAGCTGAACATATGATA
TTTGGAGTTGAAGGAGTGGATCCAGTTCGACGAGAAAAGTTGATTGAGCTGCTGGATATTGATCTGCAGTGGCGTATGCACAAGGTATCT
GATGGTCAGAGGCGTAAGAGTTCAAATCTGCATGGGTCTCCTTCACCCCTATAAGGTTCTTTTACTGGATGAGGTCACCGTTGACTTAGA
TGTTGTTGCGAGGATGGATTTATTGGATTTCTTTAAGGAAGAATGTGAACAGAGAGGAGCTACAATTGTCTATGCAACGCATATATTTGA
TGGACTGGAGACATGGGCGACTGATCTTGTTTACATCCAAGAAGGAGTTCTGAAGAGGACTGAGAAATTACCCGAGCTTCCTGAGTTGAA
GTCCTCCCCTAATTTGCTTTCGGTAGTTGAGAACTGGTTGCGTTCTGAGACCCCGATTGAGAAAAAGAAACCGGCTCCCTCTCCACCAAA
AGCTCAAAAGTCCTCTCCTTTTGGCTCTTCTCCCTTTCAGTCATCTAGACATATGGCATATTTTCGCTGATTTACACTTCCTGTTTCCAG
AGTAGAATTAAACCTTGCAGGATTGCCAATAAAAGAGATTAGAGCTGGTTCTTCGGTGTTTGCAGCTTGGAAAATGTTGTCGTTATCACG
GGCTACACCTACACCCTTGGCTTAATTCAAAAGTAGGAATTATAGCAACTCAGGTTAGATTTACATGTCGAAGCCTGAGGATGTGCCTTT
AGTGCAAGTATCAATAGTGTTCAATTCCTCTATTTATATTAGCCCATGCATTTTCTTGTAACAGCAATCACAAAGTCATTGATTATTTAT
GTTTTCGCAGAACTATAAAGAATGGATGTCAAGTTTTTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	16	ThiQ_ABC_transpt ABC_transporter Sulph_transpt1 CbiN_ATP	404
2	23399	NtrCD ThiQ_ABC_transpt ATP_GTP_A_BS Drr_ABC_transpt ABC_transporter CcmA IISP Sulph_transpt1 CbiN_ATP ABC_transptNodI	13
5	59557	NtrCD ThiQ_ABC_transpt ATP_GTP_A_BS HypB Drr_ABC_transpt ABC_transporter CcmA IISP Sulph_transpt1 CbiN_ATP ABC_transptNodI	6
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	120066	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	10
5	132223	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U249985	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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