Sol Genomics Network

Unigene SGN-U276510

Unigene Basic Information

Unigene ID:	SGN-U276510
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276510
mRNA sequence:	Length: 1714 bp

>SGN-U276510 Solanum tuberosum #4 (5 members)
CTTAGTTTCCTTGTGTGAACATACAAGAGAGCTTTGAATTTTCTCTCTTTTGATTCTCAAAATTGATCAATTCTTTGAGCTTGAAATCAC
CTCAAGAACCCAAAAAACTCATGTTTTTTCTCAGTCAACTCGTCAACCAACTGCCAACCCAGCAAGGATTTGCCTAATCATTGCTGTTTT
TCCATCTGGGTCTCTCCAAATTTGATTAAATATTCCATTTTTCCATCTGGGTGTCTCTCAATTTGATCAAAAATTCCATTTTCCCAACTG
GGTTTTGCTCAATTTGGTTAAAGAATCAATTTTTCCAACTGGGTTTTGCTCAATTTGGTTAAATAATCGATTTTTGTGCATATGGGTCAT
CAGAAAGAGGACTTAATCAATGAGCTGACGGAGTTAATCGATGGGGTTTCTGGTTTGCCGGAGTGCCGGTCGGTGTCTAAGAGGATGTAC
AGTAATTTGGTGAGAAGGGTGAAGCTTTTGAGCCCTTTAGTTGAGGATTTGAAAGATAGTGATGGTGTTGAGGTTGGAGATGATGTTGTT
CATGGACTTGAGTTGTTGAGAATTGCTCTTATTTCAGGTTTGGAGCTTCTCAAATCTGTAAATGAAGGCAGTAAGATTCTTCAGGCTTTA
CAGATCGAGAACATATCATCAAGGTTCCTAAATGTGACAGAGCAAATTGAAGATGCACTAAGCGACATTCCTTACAATAAGCTTGATTTA
TCTGAGGAAGTTCAAGAACAAATTGAACTTGTGCATGCTCAATTCAAAAGAGCCAAAGGAAAGATGGAGTCACCTGATGAGCAACTTGAA
AAGGATTTAGCTATGGCACAAAGGGAACAATATCCTGACCCCATGATTTTCAAACGGCTGTCTGAGAAACTGCATCTCAGGACCATAAAT
GATCTAAAGAAGGAGTCGCTTGCCATCCATGACATGGTCATTTCTAGTGGTGGAGATCCCGAAGAGTGTTTTGAAACAATAGCATACCTC
CTAAGAAAGCTAAAGGACTGTGCGATGACAGAGAATCCTGAACTGGATGCCCTTGAGGGTGACAAGAGTTTGATTAAGCACAGATCTCCC
GTTATTCCGGATGACTTCCGCTGTCCAATATCACTTGAGTTGATGAAAGATCCTGTTATTGTATCTACCGGACAGACCTATGAAAGGTCG
TGCATCCAAAAATGGCTGGATGCAGGACACAAGACCTGCCCTAAGACTCAGCAGACACTGTTGCATACTGCATTGACTCCAAACTATGTT
TTGAAAAGCCTGATTGCCTTGTGGTGTGAGAATAATGGTGTTGAGCTGCTAAAAAACAAGGAACTTGTAGGAATAAAAGATCTGGAGCTG
GTGGTTCGGACTGTGATCGTGCTGCTATTGATGCGTTATTACAAAAACTTGCTAATGGTAATCCGGAGCAGCAAAGAGCAGCTGCTGGTG
AGCTCCGTTTGGTAGCAAAAAGAAATGCTGATTACCGAATCTGCATTGGTGGAGCCGGGGCAATTCCTCTACTTGTTGAACTACTATCAT
CATCAGATTCTCGTACTCAGGAGCATGCTGTCACCGCACTTCTTAACCTATCCATAAATGAAGGTAACAACGGAACTATCGTAAATGCTG
GTGCTATACCTGATATAGTAGATGTACTAAGAAATGGAAGCATGGAAGCCAAGGAAAATGCAGCCGGTTACCTTTTCAGTTTATCAGTAG
TTGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	21	Armadillo	362
2	22024	Armadillo	131
5	56363	Armadillo	59
1.1	101373	Armadillo-like helical - Molecular Function: binding (GO:0005488)	564
2	118456	Armadillo-like helical - Molecular Function: binding (GO:0005488)	120
5	129030	U box - Cellular Component: ubiquitin ligase complex (GO:0000151) - Molecular Function: ubiquitin-protein ligase activity (GO:0004842) - Biological Process: protein ubiquitination (GO:0016567)	58

Preceding Unigenes (2)

Unigene	Build
SGN-U255530	Solanum tuberosum #3
SGN-U255876	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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