Sol Genomics Network

Unigene SGN-U276678

Unigene Basic Information

Unigene ID:	SGN-U276678
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276678
mRNA sequence:	Length: 1168 bp

>SGN-U276678 Solanum tuberosum #4 (5 members)
CATAAATCAAAGTCTGCTTCGATCAACGCAAAACCCTAGAGGGAATTTATCAAGATGATCCCGGTTTGCCCTTTTGCTGGAGCTTCCAGA
CCCGATGATGCAACTCTTAATAAACCTTATGACGAAAACAAACAACAGGCTCAGCCTAAAAAAGAGTCTGGAGAAGCTGCTACGGTGTCA
CCTAAGTGCCCCTTTGGATATGATTCAACTCTTAAGAAACCTTGTGACGACCAAAATAAACAACAGGATGGCCAGGAGAGCAAGCTTAAG
CAAGACTCTGGAGAATCTGCAACTGTGTCACCTAAGTGCCCCTTTGGATATGATGGCCAGGAGAGCAAGCCTAAACAAGACTCTGGAGAA
TCTGCGACAATGTCACCAAAGTGCCCCTTTGGTTATGATTCTCAAGCATTTAAACTGGGTCCTTTTAGCTGCATGATATGTCAGGCACTT
CTTTATGATAGCAGCAGATGTGTGCCCTGTTCACATGTATTCTGCAAGGCATGTCTCTCCCGCTTTAAGGACTGTCCATTATGTGGTGCT
GATATTGAAAAGATTGAGGCCGATATGAATCTTCAGAATGTTGTTGATCGCTTTATTGAAGGGCATGCAAGGATTAAGAGGTCTAATAAT
GAGCAAGAAGATATAGTGGAAAAGAAAACTGTTATATACGAGGATGCGTCTTTAGAGCGGGGAGCTTTCCTGGTTCAACAGGCCATGCGG
GCTTTTCGTGCCAATAATATTGATAGTGCAAAATCAAGATTTACTATGTGTGCAGATGACATCCGAGAACAGCTTCAGAGAATGGGGAAT
ACATCAGAGTTGTGCTCACAGCTTGGAGCTGTTCTTGGTATGCTTGGTGACTGCAGTCGAGCTACAGGAGATGCTGTATCTGCAGTTGCT
TACTTTGAAGAGAGTGTCAATTTCCTTTTGAAAGTACCCAAAGATGATGTAGAGATCACACATACACTTTCTGTTTCACTAAACAAAATT
GGAGATCTTAAATACTATGCCGGTGATTTGCAAGCTGCCAGATCACATTATTTTCGGGCGTTGGATGTTCGCCGCAATGCCATCAAGCAA
CCGTCTGTGCCATCTCAGATAGTCGATGTGGCCATTTCCTTAGCCAAAGTTGCTGATATTGATCGAAATCTCGGGGATGAGGATACTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	3278	TPR Znf_ring	5
2	26210	TPR Znf_ring	5
5	60170	TPR Znf_ring	5
1.1	104436	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	4
2	123565	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270) Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	4
5	133739	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270) Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U249778	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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