Sol Genomics Network

Unigene SGN-U276726

Unigene Basic Information

Unigene ID:	SGN-U276726
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276726
mRNA sequence:	Length: 2240 bp

>SGN-U276726 Solanum tuberosum #4 (5 members)
CTTAGGTCTTGTAGTATAAATTCCCCTACATTTACTGAAATTTTCCCTCTTCTTCCCACCCTACTGTTTCGATTTCGCTTTCCCTCCTCC
TTTCTCCATTTTCCATTGATGTCCCACAAGCAGAAAAAAGGAGGAGAAAAATGGTTGGAGTGAATAGCTTTGGGAAAACCATTTGCTCAA
TTTGCTATGAAGATCTAAACCCTATAATCGAAGATCTTCAAGCCGTTACTATTTGTGGTCACGTTTTTCACGAGCTATGTCTTCAGCAAT
GGTTTGAATACTGTGCAAAAGGAAAGAAGAAGAATTGTCCAGTTTGCAAACAGGCTTGTTCGGAAGAAAATGCAAATAGGCTTTATTTCC
AATCTATTGGTGATCCAAATTTTACAAGTCTTACGCAGAAGCCTCCTGATTATAAAGAGGATCACCGGGAGTTGAAAAATGAGGTCAAAA
GATTAGAGAGGAAAGTTGTAGGACTGACTTCCACTCTGGAAAAACAGCTGAAAGATCTCAAAGAAGTCAATGCAGAGCTGTTCACGTGCA
AGGAGGAGTTGAAAATGGAAATGACTCTAAAGATTGAAGCTGTGAAACAGGAGGCAGCCATTCAACAGTTGCTACATCTTAAATCCAAGG
AGCTAGATCAATCAACTTTGGAGTGCATAAGGCTACAAGATAGAAATATGGCTCTAGCTAAGGAGCTTGCAACACTCAAGTTAGTTTGCG
ATTTTAACTTGGAGGAAGAGGAGGTCTTGAAACGTGCTTCGTTAAGAGATGATGTTAATAGCAAAGAGACAATTGATGTCTTGAAAAAAT
CACTGGTCATCCGTAACAAGAATTACGAAGAACTGATGACCAAGTGCAACACTCTAGACAGGCGAGAGGTTCGTTATCTGAGGAAACTTC
AGAAAACTAAAGAGAAGAAAAATAAATTGAAGGCCAGGGTCCAAGAACTTGAGATGGCACTTGAAGGAAAAGATAATGAAATTTTGAGAA
TTTTGAAAGCCTCCAAGAAAAACTATCAAGGGAGTAAAGAACCCAAAGTTGACAGATGTTCATATGAGAATCAGAATAAGGCACCTGCTG
AGACAGAAGTAGATGTATGCATTGTCACTGGCTCATGTGATGATTTATCTAGACCAAAGAGAAAAAGAAAGTATAAGTCTAAGGATAAGA
GCATACCAAACATGGCAGAAGATATTATAGCTAGCACTCTTCACAAAAATAATCATGAGAAAGAATCTTCCAAAAGAAACAAAGATGGAG
GCACTCCAGAGACTTCCAGTTATGTGCATGAAGGATCATATCAAAACTTGCACCAACCATTTGACCATAAAAAGGCTGTCCATGATAGTT
TTTTGTCAAGGCCGGAGGCAGTTTTTGGGGCCACTGGTGGAAGTCTAGGGCATGGATCAGGAAATAAGGATGGAATGTCAGCCTCAAGGA
ATTGTAGCAAGAACAGTAAAGAAAACATGCCCCCAGTGATTATTCTTGATGATGATGATCTTCCGCCTTTAGATGATATTACACAGCACC
AACCCGCATTTCACATCAGGAAAGAGACTTCTTCACCAGTTGTACTTGCCAAACCAGGAGACAGCTGCTTTTCTGGTGGATTGTTAGGTC
CTGATGGGAATTACTGGCACTTGGGAAAATGGTGTAAGAGAAAGTAAACGGCAAGGATCTGGATTGCTGTCTTGATGCAAGGATCAGGTG
CAAGTGCTGGTGATTTGATTGCTGTAAGAGCTGATGGTAGAGGTGGTTGTATCAAATTTCTGCAATCCAAAAATTCGGCATCAGTGCATA
ACAATACTGAGAGTTTGCCATCATTACACCAAATCAAGTAGTTCCCAGTCTCAAAGATTCTTGCAAATAGATAGCTTCTTCAGAAGGGTC
GGTGAATACCTGTATTCATAGTTATGGATTTCCTACTGTAAAGTATCCATCGAAGACGTAGTTAGTCCATTCCCCTGTACAGTGTTTAGG
GGTTTCATTTCAGCAACCTAGTTGTACTTACATTTGATTGATTCGTTATGTTGCTCGATCAATACATATTGAAAGTGCGCCTCTGTGGTT
CTGAAGATAGCGAAACAGTTGTTCCATGCAAGCATGCACTTCATTTTTTCTAGTTGCTTACTAGGGGAAGACGATACTTTGTGTATTATC
TGCTTGTGTTAATGCCCTGAATTGCAGCCGAGTTTTTAGTACAAACAATCTCTTCACATTGAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
hip1	potyviral helper component protease-interacting protein 1

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	10	Znf_ring	594
2	27710	FlaC_arch UPF0044 Znf_ring	4
5	63630		3
1.1	103123	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	8
2	121790	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	6
5	134397		4

Preceding Unigenes (2)

Unigene	Build
SGN-U254478	Solanum tuberosum #3
SGN-U264681	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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