Sol Genomics Network

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Unigene SGN-U277741

Unigene Basic Information

Unigene ID:	SGN-U277741
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	277741
mRNA sequence:	Length: 1628 bp

>SGN-U277741 Solanum tuberosum #4 (4 members)
CCGGCCGGCAAAAATTCCCACTAAAAGCTGCCATGGTTAACTTTAAAGCTATTTCCGTTAATCTCTTCCTATTAGTATTACTATGTCCGG
CGTCAGCTCAGACATCAAATTCCCCTGATTCCGAGAATCGGTTCGAGTACCCGAGTGTCAGTCCTGCTATGGCTATTATCATAGTGATAC
TTATTGCTGCTCTATTTTTCATTGCCTTCTTCTCAATTTACATACGCAACCGCGGTGCAACTAACGGAAGCATCCGTCAAACCTTCTCCA
TGCGACGGCGTACTGCTGCTGCTACTCGTGGACTTGAAGATTCCGTCATCGAAACTTTTCCTACCTTTACTTACGTCGAAGTAAAGGATC
ATCATATTGGGAAGGGAGCTTTGGAATGTGCGGTGTGTTTGAACGAATTTGAAGATGACGAAATGTTGCGTTTGATCCCGAAGTGTGATC
ACGTTTTTCACCCTGAATGCATCGATGTTTGGCTCAAATCTCATGTAACTTGCCCTGTTTGCCGAGCTGATCTTACTCCTAAACCTGATG
AACCGGTGCCGGTTCAAACTCCTGAGACGAACCGGGAATTGGGGCAAGAACAGGAGAATTTGCAGCAAAATAACGAAGTTTCGATTCAAA
TAGAGGTAGATGAGGATTTGATGTCACAGCAAGAGGAGAGCTCTGTTAGACCAGAAGTTAAACGAAATTTGAGTTTCAACGCGGCGAACC
GGCCGCCGAGGTCTTTTTCTGTGAAGAGACCAAAGATGTTCAGCAAATTCAGGTCACATTCGACCGGTCACTCATTAGTGGTACCAGGGG
AGAATTTAGACCGGTACACTCTTAGATTGCCGGAGAAGGTGAGGAAAGATGTAATGGACCGGGCTCTACTAAACCGGACAAGGAGCTGCG
CAGTCACGCTACCAAGACACGGTAGCACCACAAGAGGGTACAGAGCCGGTCCGGGAGAGGGAAGCAACAGAGGTACAAGGTCATTCAAAA
GAATTGACCGGTTCGACCCGGAAGCAAAATCAGACCGGTGGTTTCTCAAGATTGCACCACCATTCTTTACCAGAGGTTCATCAATGAAGT
CACCAAAAGTAAGAGCTGATAACGAAGAAGCATCCACATCCCGTAGTAATGTGAAAGTAGCAGTAAAAATGCCGTCCTTCAAATGCCTGG
AGCCGAAAGGTGATGAACCGGGTTTATTGGCAAATGACTCGGCTCGATCTCCGGTTTAAAGAATGTGGTATTTTCTGACTCGGGTTTAAT
TAAGCGTGGCGGAAAGGGAAAACTTTTTGTTCGCCGGCAAATGTGGAGAACGCGTGGTCGATGCTAATGGGCTGGGCCCACCAACCTTTG
AAACTTCCGCTATTGACTTTAATGCACATATATATAATGTCAAAAGTTGAATTCAAGGTTTTTGATTTCTAGAATATTCTTTAAAATGTT
GATTAACTTTTATTATTTAAAAAACAAATAATTTTCAACTTTGGGTTTATCTGGGGTGATGAGATGGTGTTCAATAGTGTGTGTTTATCT
AGATGGATGATGTAATGCCCTAAACACAATGTAATTATACTATGTGTGTTACTTTGTTCTTGATTGATAGAGATATCAGGTTTTCCTCTT
AAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AB061244	ring H2 zinc finger

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	10	Znf_ring	594
2	22012	Znf_ring	149
5	56310	Znf_ring	91
1.1	101372	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	566
2	118459	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	118
5	128989	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	78

Preceding Unigenes (2)

Unigene	Build
SGN-U255281	Solanum tuberosum #3
SGN-U265668	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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