Sol Genomics Network

Unigene SGN-U278393

Unigene Basic Information

Unigene ID:	SGN-U278393
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	278393
mRNA sequence:	Length: 1969 bp

>SGN-U278393 Solanum tuberosum #4 (4 members)
CAGCCATCCTTACCCCTCACCCCCCCAATCTCCCCCACCCCACGACTGGCCTCATCTTCTTCCCCTGTATTCCGGAGGCCATTGCTACTC
TCTTTCATCACCAAATGTTGAAGATATCGCTTGATTTCCCAATTTCTCATCTTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTT
AGCTTCTGCCAGGAAAATGGACGGAACAGCAGTGCAAGGCACCAGCAGTGTTGACTCATTTTTGCGGAACTATAAGCTTGGGAAAACACT
TGGCATTGGATCGTTTGGCAAAGTTAAAATAGCTGAACATACCTTAATAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAAT
CAGGAATATGGACATGGAGGAGAAAGTCAGTAGAGAAATCAAAATATTGAGATTGTTCATGCATGGTCATATTAGTCGGCTTTATGAGGT
CATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGCTATTTGATTACATTGTCGAGAAGGGCAGATTGCA
GGAGGATGAAGCTCGTAACTTTTTTCAGCAGATAATTTCTGGTGTGGAGTACTGCCATATAAACATGGTGGTTCATAGAGACCTTAAGCC
TGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGAC
AAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGT
TATTCTTTATGCTCTTCTCTGTGGCACCCTTCCATTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAGGGTGGAATATATAC
TCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCAAGGATGCTTATAGTTGACCCGATGAAGCGAATGACTATTCCTGAGAT
TCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGTTATTTGGCCGTACCTCCACCAGATACAATGCAACAAGCCAAGAAGATCGATGA
AGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAGGGCACTGT
TGCGTACTATCTGCTCCTGGACAATCGCCATCGTGTATCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATGGAATATGGTTACAA
CCGGATCAATTCTAATGAAACTGCTGCTTCCCCTGTTGGTCAACGCTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTT
CCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGTCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTCTGAAAGCTCTGCAAGAACT
GAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCGTACCTGGTCATCATGAAGGCATGGGTGTTAA
TTCCATGCACGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGACACAAAATTAACAAATGTGGTCAAGTTTGA
AGTTCAGCTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGGCTTCAGGGTCCACAGTTCCTCTTCCTGGATCTCTGTGC
TGCTTTCCTTGCTCAGCTTCGAGTACTTTGAAGTCTCTGAAATAAGGAGCTAAGTTGGAAAGCTCGTGCTTGTATATAATTGGTATACCA
GCTCAGTTACTGCATTTTGTCTTGTTAACAAATTTCACCCTGCTTGGTCAGAGGTGCCTAGCAACTTTTTTTTTGTTGATTCGCTAGGAG
ATCTAGCTCACTTTCTTTTTTAATGTTTCTTTTAAACGTTGTCAGTGTCTATGGAATTTCAGTTACCTACAGTTTCTAC

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
X96372	PKIN1 gene (258bp)	protein kinase
snf1	potato sucrose non-fermenting 1	SNF1-related protein kinases

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	56271	Prot_kinase Ser_thr_pkin_AS	192
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (1)

Unigene	Build
SGN-U255021	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer