Sol Genomics Network

Unigene SGN-U278628

Unigene Basic Information

Unigene ID:	SGN-U278628
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	278628
mRNA sequence:	Length: 901 bp

>SGN-U278628 Solanum tuberosum #4 (4 members)
CTTTGAATCCTTAACCGGTGATGAAAGCTACCAGAGCCGTGATCTTGAGAAGACATCCCAACAACTTGCTAAACCGCTTTATGATGAGAA
GGTGCAGCCTACCACATTGATACCAAAACAAGTTGGCAACATGTATACCGCATCTCTTTATGCTGCTTTTGCATCCCTCCTTCACAATAA
GCACAATACATTGGCTGGTCAGCGGGTAATCATGTTTTCCTATGGGAGTGGATTGACTGCGACTATGTTTTCGCTAAAGTTTAACGAAGG
TCAACATCCTTTTAGTTTGTCAAACATTGCAAGCGTGATGAATGTTGCAGAGAAGTTGGAATCGAGACATGAGTTCACTCCTGAAAAATT
CATCGAAATACTGAAACTAATGGAGCACAGATATGGTGCCAAGGACTTCTTGACCAGCAAGGATTGCAGCCTTCTCGCACCAGGAACCTA
CTACCTAACAGAGGTTGATTCCAAGTACAGAAGATTTTATGCAAAGAAGGCTCACGAGAATGGGCAGGTCAACGGACACTAGGACACCAA
ACATGGTCCTTGCACGGTGTAAGGCCATATAGTAGGCTCGTGCTGTTTAAGTTATTGTTAGCGCATAGAAGAATAACTAGTGCTCTGGCA
GATTCGATTGTTATTACATGTAGTTTCTTTTCCAGAGTAGTAGATCCTATGCCTTTTTTCTTTCTTTTTTTCAGTTCCCGACGAGTTCTA
ATGTTGTGCATCTCCTTGTCTTCACCTGTTTGTGAAATGATTGTAAAAGTCATCAACCTAGTCTTTGGTTGGAATTCATTTCTCATCTGT
AATAAACTAATGTATTTATGAGAAAAATCATTTCAATGGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGACTAGTTCT
C

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	855	HMG_CoA_synt_AS HMG_CoA_synth	22
2	22666	HMG_CoA_synt_AS HMG_CoA_synth	22
5	56856	HMG_CoA_synt_AS HMG_CoA_synth	21
1.1	102217	Hydroxymethylglutaryl-coenzyme A synthase C terminal Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084)	19
2	119206	Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase C terminal	19
5	129619	Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase C terminal	18

Preceding Unigenes (1)

Unigene	Build
SGN-U253528	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer