Sol Genomics Network

Unigene SGN-U278972

Unigene Basic Information

Unigene ID:	SGN-U278972
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	278972
mRNA sequence:	Length: 1198 bp

>SGN-U278972 Solanum tuberosum #4 (4 members)
CGAGGGTCAACAGATCCCCCTAATGATAAAATAAAAGTAAAATCACTTTCAGTAAATTATTTATCGCCTAGAATTTAGAGAAAAATAAAA
AACAAAATAGGTAGTAATAAAATCTGTAAAATATTATCGATAATTTGTCATAGAATAGTTCATTTGTGAGCTACATTCAACTGCCAATAC
TTTCTCCGATGCCTTTCCCTCAACTTCAACAGCCATTTCCATAATCGGCGACTTATAGTTCAGTTTTCTAACACGCGATTTTGCTTATTC
GGTCGGAGCGGCGATGGGCGGCGGCGGTCCCAGAAACTATTCGGCCAATCCAAATGATTACAAGCTTCTCGAAGAAATCGGTTATGGAGC
CAGTGCAACAGTTTATAGAGCGATCTATCTTCCTTACAATGAAGTTATTGCAGTCAAGTGCTTGGATCTCGATCGCTGTAACAGCAATCT
GGATGACATACGCAGGGAAGCTCAAACTATGAGTTTGATAGACCATCCTAATGTAATAAAGTCATTCTGTTCATTTGTTGTTGAGAACTA
CCTCTGGGTGGTGATGCCCTTCATGGCTGAGGGCTCTTGTCTACATCTCATGAAAATAGCATATCCAGATGGATTCGAAGAATCTGCTAT
TTGTTCTATGTTGAAGGAAACTCTCAAGGCGTTGGAATATCTCCATCGACATGGGCACATACATCGAGATGTTAAGGCTGGGAATATATT
ACTGGACACTAATGGGGCAGTAAAGCTGGGCGATTTTGGTGTTTCAGCATGCATGTTTGACAATGGTGATAGACAGCGGTCTAGGAATAC
CTTTGTAGGAACTCCGTGCTGGATGGCACCAGAAGTTCTGCAGCCTGGAACTGGATATGATTTTAAGGCTGACATTTGGTCATTTGGAAT
AACTGCCCTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAGTACCCTCCAATGAAGGTACTTCTGATGACAATACAGAATGCCCCTCC
TGGACTTGATTATGACAGAGACAAAAAATTCTCCAAGTCATTCAAGGAAATGGTTGCGATGTGTTTGGTGAAAGATCAAACTAAAAAGGC
CAACCGNTGAGAAGTTGTTGAAGCATTCTTTTTTCAAACAATGTCAAGCCCCCAGAGCTTTCTGTAAAAAAACTCTTTGGTGACCTTGCA
ACACTTTGGAATCGAGTTAAAGCCCTAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	22729	Prot_kinase	21
5	57171	Prot_kinase	16
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118993	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	23
5	129719	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	16

Preceding Unigenes (1)

Unigene	Build
SGN-U252872	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer