Sol Genomics Network

Unigene SGN-U280397

Unigene Basic Information

Unigene ID:	SGN-U280397
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	280397
mRNA sequence:	Length: 2759 bp

>SGN-U280397 Solanum tuberosum #4 (3 members)
AGTATGTATTCAACACAGAAGCTCATCCTATTCCAATAATTTCTAGAAGTGTATGATAGATACTTTGCTTGCAAGAAGAATTTTTTTTCC
AGTATTGGCGGAGATTCAGATGACCCAAGAGAACATGTTTCAGCAATCTCAGATGGAATTTAAATTCGTTTAAGTCGGTTCATTAGGTTG
CATGTGACCTCATGGAAGCTTATTCACAAATGTTCATTTAGATGAAGCTCCCTGAAATTTCCATCTGAAATGCTCCTGAAACTTCTACTC
GAGTGATATTTGAGGCGGGGAATTCTCGATGAACGTCTTGTTTGTGTAGTGCATACAGAGATAATTACAATTTTTATAAAGTGTTAAAGG
CTAAAAGCTCCATGTTATTCATGGAAAGAACAGGATAGTGTAATCCTTCTGTAGTAAGTTGGAACTTATTCTTGTAATTGATGTATTACA
TCTGCAGCTTTGATTTCTCCCTTTGGAGATACAAAGATTGAATCATTTAGCCTAACATTTACACAATGAGATCAATATACAATTGCTTTG
AACCTCTTCTCTACACTTCTGATAATTTTCCTTCGCGATCAATGATGATTATATTCCATGCTCAAGCATTTGTGTTAAAGGAAAAACAGA
TGGTCGCCATCTCTGATGACATCAATGTCATCTATTTCAGCATCCTCTGCATTTACAGCTCTCTTGAAATCGTAGCTTCCAAATCTTTGA
CCTGCTACTCTGAATAGCTCTTGTAGTGAATCCGGTAGAATGATTAGTTTCCCAAACTGTTGATGCAATGATTCTTTTTTCACGTGAATG
GTGATTCTCTTCTTATGGTGGGTAGATTTTGTCCCTTGAGAGCCACTTGAACTGGTACTACATGTGGGTCTTTTTAGGCAAGAGTTGGAA
CAACTGGGGACCTCAGGCTTCAGTTGACAGCTCTTTGTTCCCTCATCTGGTCCAATGAGCTCCACTTTATGCTCACTTAACTCACTCTTA
TTTTCAAGATTTAATGACAAATCATTCATGGTTTTGTTTACTTCTTGTCCATCATCTCTCTCTTGCTTCTTAACTCTAGCTTCCAAATTA
TTGATATCTATGCTAGTAAGTGTGATATCATCATGCCTTTTGATTTCTGGTCCTGCATTTGTTTGGTGGTCCACATAACCAAATCCTCCA
AATCCCTGAAGTTTCATCAAAAGATTGTTCATAATTATACATTCATCTTCTGGATTTGCGCGAAGAATGTTCATCAATGATGTCCTACTT
AGCCTTAGAATCTGAGAAATCTCGGTAGTTCGAACAGCAAATGGCTGTGGTCTCCCACATAAAACACCTATGTCTCCAAATATTTCTCCT
GCAACAGCCTTTCCAATTATTTGCTCTAGCCCTTCAATCTGTGCTATAAATTCCACTGCTCCTGAAACTATTATATACAGATCAGTTGGT
GCCTCATTCTGCAAAATTACTTCTTGCTTCGGAGGGAAGTATTCAGCTTCCATTTCAGGAACCAGTTGGAAAAGGAGGTTCCGCGAAACA
CCTTGGAACAAATGAACATTTTGAACTATAGGAAAAAACAGATGGTGTGCAATGCTTGTTCTGATGGCTTTAGGCAGGCCATTAAGAGTC
TCTTCTTGTTTTAATGTTTCTGTTTTGAACTTGAGACACATGTGAGACAAAACCTGATCTTGTACTCTTGGAGGCAACTGATTCCTTTTC
GCGAATTCTTGAGCTGCTTTCACTGCCTCCCTGAAGTTTCTGGTGCGACTAGTCCAATGAACAACAAGGTTAGTCATGTTTCCAATTATG
TAAGATGTCAATCCCAAGTTGAATAACATGTAAAAGATATCAAACAGCATCTCTCTTGAGTTCTCAGCATGCAAGTCTCCATAACCGGTT
GTTGTCAGCGTTACAATAGACCAATACAATGAGGTTATGTATCTGTCACCAACACTTAGTTGCTTGAAATCTGGATATACAGCACCAATC
CATGTCTTTTTCGAATCAGGATATCTATCAGCAATCATATAGTTAATGCATCCAGCACAGTGCACTGCAAACAATGTCACTGATACAAGT
TTTGTACATCGCGTCCAGAAGTAGTTGAACCGGATATCCTTCTCAAGTCTTGCAAACAGGGCACTGACTCGTCTGAGACGCCATAATCTG
AGCATGCTGAGCAATCTGAATCCAACTCCTCCGCTTTCTTTGTGACCCGTGAAGACGAGGATCAATGATTGGAATGGTACAGTAGAACAT
ACATCAAAAATGAACCATGTTGACAAGTACCTTATTGCTATTTTCTTAGGTTCATCAACAAGAAGATAAGACTCTCGATGAAGATACGCG
ACGAAGAAGGTAAGTAAAATGTCAATAGCAAAGAAGCAATCAACAATGTTGTCAACAATGAACAGAGTATCATCTTTCTTGTATGACAAG
AATGCAACCTCAAACAGAGAAATCCAAGCGGTGTAAATAACCATAACAACTAGAAACATCTCCCAACACCTGTAACGTGGATTAAAAGGC
GAAATGATGAATCTTCGGAGTTTAGTAGCGTAGTTGATTCGAGCTCCAAGTGATGGGAGAAGATCACTAGAGAAGAAGCCACTATGGGTG
GTTTCTGTATCCATTTGGAACTCGTCCACACAGAACCGTTGTAAACAGTTTTTAGCATAAGAAAATGACATTATTATATATTGCTGCTTC
TTTTTTGTTGATGTGGTTTTTTTTTTTTTTTTTTTTTTTTTCGAGACGGCCGCGAATTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
kst1	K+ channel	potassium uptake in guard cells

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	19	ANK	371
2	22407	Ion_trans K+channel_pore cNMP_binding EAG_ELK_ERG	31
5	56657	Ion_trans K+channel_pore cNMP_binding EAG_ELK_ERG	27
1.1	101379	Ankyrin	460
2	118883	Ion transport - Molecular Function: ion channel activity (GO:0005216) - Biological Process: ion transport (GO:0006811) - Cellular Component: membrane (GO:0016020) K+ channel pore region - Molecular Function: potassium channel activity (GO:0005267) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020) Cyclic nucleotide-binding EAG/ELK/ERG potassium channel - Molecular Function: voltage-gated potassium channel activity (GO:0005249) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020)	27
5	129420	Ion transport - Molecular Function: ion channel activity (GO:0005216) - Biological Process: ion transport (GO:0006811) - Cellular Component: membrane (GO:0016020) K+ channel pore region - Molecular Function: potassium channel activity (GO:0005267) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020) Cyclic nucleotide-binding EAG/ELK/ERG potassium channel - Molecular Function: voltage-gated potassium channel activity (GO:0005249) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020)	22

Preceding Unigenes (1)

Unigene	Build
SGN-U256521	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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