Sol Genomics Network

Unigene SGN-U281354

Unigene Basic Information

Unigene ID:	SGN-U281354
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	281354
mRNA sequence:	Length: 1447 bp

>SGN-U281354 Solanum tuberosum #4 (16 members)
CAAAGACTCATTTTTTATCAGTTGCCCTAAAACCCTTTCCTTAATATATGCTAGAACCAGAAACAAAAACCAGGCAGCTGCAAAACCCTA
GTACCTCTTCTCCCTCAGCAGCAGCTGCTCTGTTACTAGCCTTCAAGCCTAGGCAGGTAGTTCTAGCAGAGTCATCAAAATCCAATCTTG
TTATGGCTAAGAAGGAGCAGAATCAAGAAAACAAGTTTGGTTTACAACAATCTATACTCCATTATCTTAACCTCAATGGTTTCTCCAAAA
CCCTCAAATACTTTCTTAAAGAAACTCAAACTGAGAGTGACAGTTGGAAGTCTTGTTCCCATAATTTGGAGGATTTGTACAGCAAGTATC
TAAACAACAGCACTGATAATGATACAATATCAAAGGGCGACAAAGAGCCAGCGCTGTGTCAAGACGGCATGAAGGGAAAAAACATAAGTA
GCAGTGATGCCGACTCTCAGGAAAAAGTTAGCAAGAACAAGAAGAAAAAGAGAAGTGAAGACAATGATATTGCTGTTCCAGATGCGTCTC
ATCCTGAAAGTGTTGATAAATCCATGAAAAATGGTGCTACTGCTCAAGAGGTTTTAGCAGATGATAAGGCAGACGTGCCCTTGAAGAAGC
AGAAGGAGAAGAAAAAGAAGAAAACTGAGGAGAAGCCAGAAAATGTAGACCCTATCGACAACGATAATAATGATCTTACTGTGGAAACAA
CTAAAAAGGATAAAAAGAAGAAGTCCAAGGAAAAGAGTGGAGCTACTGATTCTAAGGATTCCAAGAAGAGAAAAAGATTAGCTTCTGATG
AAAATGCAAATCAGGGAGTTGATGGGGTTGAAACTGAAGAATCAAAGCGCAGAAAGACCGAAGACTTGGAAGAATCGAAGGCTCTTTGCA
CTGACAATGGAATTGAACAAAACGGTGAAGTTGTTGAAGCAAACTCTAGTGGTAATAATCAGGATGAGTTGAACAACTCTGCTAAGCAGA
AATCATCAAGGAAAGACTTTAATGGATCAGCAGAGCCAAAAACCGTAAATGCCTTTCAAAGAGTGAAAATTGATCAGGTGGAGTTTAAAG
ATGATAGACTTAAAGATAATTCTTATTGGGCAAAGGATGGTGCAGACATTGGCTATGGTGCAAAGGCACAGGAGGTTTTGGGCCAGGTGA
AAGGAAGGGATTTCCGACATGAGAAAACCAAGAAGAAGCGAGGCAGTTACAGAGGAGGGATAATTGACTTGCAATCGCACTCCGTCAAGT
TCAACTACTCAGATGAGGAGTAGCCTGTTTCAAGCATATTTTCAGGGAGAGCCTCTTCATCCTTTTACAAAGAAAATATAATTATTTTTC
GCCGTTGTGGGGTTTTTGATTATTTAAGCAGAACGATAAAGATTTCATGAAACTTGAAGTTGATCCTATGCAAGAAAGTCCTTTGCATTT
AAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	6
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	56	Dehydrin	221
2	26319	LisH SRP40_C	5
5	61145	LisH SRP40_C	4
1.1	101387	NOSIC PWWP	377
2	122753	Lissencephaly type-1-like homology motif SRP40 C-terminal	5
5	134077	Lissencephaly type-1-like homology motif SRP40 C-terminal	4

Preceding Unigenes (1)

Unigene	Build
SGN-U245132	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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