Sol Genomics Network

Unigene SGN-U282460

Unigene Basic Information

Unigene ID:	SGN-U282460
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	282460
mRNA sequence:	Length: 1304 bp

>SGN-U282460 Solanum tuberosum #4 (2 members)
GTGGAGCTAACTCCCTTAAGATCAGCCTTAGTTGGATTGCCTGGAGTCAATGGTCTATCAACGGAGCAACGCAAAAGGCTGACCATTGCA
GTTGAACTGGTAGCAAACCCCTCTATCATTTTCATGGATGAACCAACTTCAGGGGTTGGATGCAAGAGCTGCTGCCATTGTAATGAGAGC
TGTTAGGAACACTGTCGATACAGGAAGAACCGTCGTCTGTACCATTCATCAGCCTAGCATCGACATTTTTGAAGCCTTTGATGAGCTATT
TCTAATGAAACGAGGAGGACAGGAGATATATGTTGGTCCTCTGGGTCGCTATTCTTGTCATTTGATCAAATACTTTGAGTCATTGCCTGA
AGTTAGTAAGATTAAAGAAGCTTACAATCCAGCAACTTGGATGTTAGAAGTCACAGCCGCTTCTCAGGAAATGATGTTAGGAGTTGACTT
TTCTGATTTGTACAAGAAATCAGACCTCTACAAGAGGAACAAAGCCTTAATTGCTGAATTAAGTACGCCTCGTCCTGGTACAAAGGATCT
ACATTTTGAAACTCAATTTTCACAGTCTTTCTGGACTCAATGTGTAGCATGTCTCTGGAAGCAACATTTGTCATACTGGCGTAATCCATC
TTACACGGCAGTTAGATTCATCTTCACAGTCATCCTAGCACTTGTCTTTGGCACATTGTTCTGGGATCTCGGTAGCAGAGTGAGTCAGAG
CCAGGATCTTTTTAATGCTATGGGATCTATGTATGCTGCAACTCTCTTCCTTGGTGTACAAAATTCATCATCAGTCCAGCCTGTTGTAGC
CGTTGAGCGTACTGTATTTTACAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTACCTTATGCCTTTGGACAGGTTATCGTTGAAATACC
TTATGTATTTGTCCAAGCAGCTTTCTATGGTATAATTGTGTATGCAATGATCGGATTCGAATGGACTGTTGCCAAGTTCTTTTGGTACTT
ATTCATCATGTACTTCACTCTCTTGTACTTCACCTTCTATGGCATGATGACTGTGGCTATTTCCCCGAATCAAAACGTTGCTTCTATAGT
AGCGGCCTTCTTCTATGCAGTATGGAATCTCTTCTCAGGATTCATCGTTCCCCGACCTCGTATTCCAATATGGTGGAGATGGTACTATTG
GCTTTGCCCTGTCGCGTGGACCTTGTATGGTCTTGTTGCATCACAATTCGGAGACCTCCAAACTATGCTTAGCAAGGATGAAAATGTGGA
ACAATTCTTGGGGCGTTATTTTGGATTTAAGCATGATTTTCTAG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
abc2	ATP-binding cassette transporter ABC2	ATP-binding cassette transporter

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	IVROOT	Root	5850	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	16	ThiQ_ABC_transpt ABC_transporter Sulph_transpt1 CbiN_ATP	404
2	22028	NtrCD ThiQ_ABC_transpt ATP_GTP_A_BS Pigment_permease Drr_ABC_transpt ABC_transporter CcmA ProV IISP Sulph_transpt1 Sp/ptABC_transpt CbiN_ATP ABC_transptNodI	122
5	56380	NtrCD ThiQ_ABC_transpt ATP_GTP_A_BS Pigment_permease Drr_ABC_transpt ABC_transporter CcmA ProV IISP Sulph_transpt1 PDR Sp/ptABC_transpt CbiN_ATP ABC_transptNodI	55
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	118465	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	113
5	129053	ABC-2 type transporter ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	51

Preceding Unigenes (1)

Unigene	Build
SGN-U267368	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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