Sol Genomics Network

Unigene SGN-U282597

Unigene Basic Information

Unigene ID:	SGN-U282597
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	282597
mRNA sequence:	Length: 735 bp

>SGN-U282597 Solanum tuberosum #4 (2 members)
GTAAAACCCTCAGCTTTGTGGTTCTTCAAACACAAATCGTGGGGAAATGACTACTTTCAAGAGAGCTTCAAGAGCTCTCACATCCAAATT
AGCTGCAATTTATACTTGCAATTTTCATCCGGTAACCTCTTTATCGCATTTTTCTTATACTCAAAATGCTTCATTTTGCTCTCGTCCTCG
CCAAAACAATAAAGAAGGATCAACTATAGATTTGAATCAGTACCCTTCTGATAACATTCGTAACTTTTCAATTATTGCCCATGTTGATCA
TGGAAAATCAACCTTAGCTGACAGACTTCTGGAACTTACTGGAACCATTAGAAAAGGACATGGTCAGCCTCAGTACTTAGATAAATTGCA
GGTAGAGAGGGAACGGGGAATAACTGTTAAAGCCCAAACAGCAACTATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTT
GTTGAACCTTATTGACACACCTGGGCATGTGGATTTTAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGTGCCCTTTTGGTTGT
TGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGCTAATTTTTACCTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAA
AATTGATCAACCCACTGCTGATCCAGATCGGGTAAAAGCACAGCTCAAATCTATGTTTGACCTTAATCCAAGTGATGTACTATTGACATC
AGCAAAAACTGGTCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	50	ProtSyn_GTPbind	231
2	23591	EFTU_D2 PrfC Cons_hypothATPbd Small_GTP LepA ProtSyn_GTPbind EF1_alpha IF2 tRPa GTP-bindding_dom TEF_SelB EF-G EFG_C EF-Tu	12
5	57867	EFTU_D2 PrfC Cons_hypothATPbd Small_GTP LepA ProtSyn_GTPbind EF1_alpha IF2 tRPa GTP-bindding_dom TEF_SelB EF-G EFG_C EF-Tu	11
1.1	101378	Heavy metal transport/detoxification protein - Biological Process: metal ion transport (GO:0030001) - Molecular Function: metal ion binding (GO:0046872)	495
2	120489	Elongation factor Tu domain 2 - Molecular Function: GTP binding (GO:0005525) Elongation factor G III and V Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) Elongation factor G C-terminal - Molecular Function: GTP binding (GO:0005525) GTP-binding protein LepA - Molecular Function: GTP binding (GO:0005525) Protein synthesis factor GTP-binding - Molecular Function: GTP binding (GO:0005525) - Biological Process: protein biosynthesis (GO:0006412)	9
5	130775	Elongation factor Tu domain 2 - Molecular Function: GTP binding (GO:0005525) Elongation factor G III and V Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) Elongation factor G C-terminal - Molecular Function: GTP binding (GO:0005525) GTP-binding protein LepA - Molecular Function: GTP binding (GO:0005525) Protein synthesis factor GTP-binding - Molecular Function: GTP binding (GO:0005525) - Biological Process: protein biosynthesis (GO:0006412)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U257601	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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