Sol Genomics Network

Unigene SGN-U283393

Unigene Basic Information

Unigene ID:	SGN-U283393
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	283393
mRNA sequence:	Length: 640 bp

>SGN-U283393 Solanum tuberosum #4 (2 members)
CTGGAGGCCGATAATACCACAGAGTATGCAGCATATGAAAGAGGGGGTATCGTCACTCAGGTCAAGGAGCCTAAAGTGTTAAAGTTCAAC
CCACTGCGTAAAGCAATTAGCGATCCTGGTGACTTTCTTCTGAGTGACTTCTCAAAGTTTGACCGCCCACCTATTTTGCACTTGACCTTT
CAAGCCCTAGATAAGTTTGTGTCTTTATCAGGACGTTTTCCTGTTGCTGGATCTGAGGAAGATGCTCAGAGGCTAATCTCACTTGTGACT
GACATGAACAATAGTCAAGATGCAAAAGTTGAGATTGACCATAAACTTATTCGTAACTTTGCATTTGGTGCAAGGGCTGTGCTAAACCCA
ATGGCGGCTATGTTTGGGGGTATCGTTGGGCAAGAAGTTGTGAAGGCTTGCTCTGGGAAGTTCCATCCACTATACCAGTTTTTCTACTTT
GACTCTGTTGAATCTCTTCCAACTGAACCATTGGATCCAAATGATTTGAAGCCCTTGAATAGTCGTTATGATGCCCAAATCTCAGTTTTC
GGAAACAAGCTACAGCAGAAGCTGGAAGAGGCAAAAGCTTTTGTAGTTGGGTCTGGTGCACTTGGGTGTGAGTTCTTGAAGAATTTAGCT
CTCATGGGGG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF357838	AF357838 ubiquitin activating enzyme	ubiquitin activating enzyme

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	218	ThiF_domain	69
2	22878	Uqtin-activ_enz ThiF_domain Lipase_AS UBact_repeat	18
5	57069	Uqtin-activ_enz ThiF_domain Lipase_AS UBact_repeat	17
1.1	101449	Protein of unknown function DUF537	148
2	119407	UBA/THIF-type NAD/FAD binding fold - Molecular Function: catalytic activity (GO:0003824) Ubiquitin-activating enzyme E1 - Biological Process: protein modification (GO:0006464) - Biological Process: ubiquitin cycle (GO:0006512) - Molecular Function: ubiquitin-like activating enzyme activity (GO:0008642) Molybdenum cofactor biosynthesis Ubiquitin-activating enzyme repeat - Molecular Function: ubiquitin activating enzyme activity (GO:0004839) - Biological Process: protein modification (GO:0006464) - Biological Process: ubiquitin cycle (GO:0006512)	16
5	129746	UBA/THIF-type NAD/FAD binding fold - Molecular Function: catalytic activity (GO:0003824) Ubiquitin-activating enzyme E1 - Biological Process: protein modification (GO:0006464) - Biological Process: ubiquitin cycle (GO:0006512) - Molecular Function: ubiquitin-like activating enzyme activity (GO:0008642) Molybdenum cofactor biosynthesis Ubiquitin-activating enzyme repeat - Molecular Function: ubiquitin activating enzyme activity (GO:0004839) - Biological Process: protein modification (GO:0006464) - Biological Process: ubiquitin cycle (GO:0006512)	16

Preceding Unigenes (1)

Unigene	Build
SGN-U267951	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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