Sol Genomics Network

Unigene SGN-U287371

Unigene Basic Information

Unigene ID:	SGN-U287371
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	287371
mRNA sequence:	Length: 1404 bp

>SGN-U287371 Solanum tuberosum #4 (1 members)
GAATTCGCCACGAGGCAACAATGGCATCTTTCATCAACAATCCCTTAACTTCTCTCTGTAACACTAAGTCTGAACGTAATAATCTCTTCA
AAATTTCCCTTTACGAAGCTCAATCACTGGGTTTTTCCAAGCTTAATGGCAGCAGAAAAGTTGCTTTCCCTTCTGTTGTTTGCAAAGCAG
TGTCTGTACCAACGAAATCGAGTACAGAAATTGAAGGGCTTAACATCGCTGAAGATGTTACACAGCTTATTGGGAACACACCAATGGTTT
ACCTTAACACCATCGCTAAGGGTTGTGTAGCAAACATTGCTGCTAAACTTGAGATTATGGAACCTTGTTGCAGTGTTAAGGACAGGATAG
GGTTCAGTATGATAGTTGATGCCGAGGAGAAGGGACTTATATCTCCGGGGAAGACTGTTCTAGTTGAGCCTACAAGTGGAAACACAGGCA
TTGGGCTTGCCTTCATTGCTGCTTCCAGAGGATATAAGCTCATCTTAACGATGCCTGCATCAATGAGTCTTGAAAGAAGGGTCATTCTAA
AAGCTTTTGGAGCTGAACTTGTTTTAACTGATCCAGCCAAAGGGATGAAAGGAGCTGTTTCAAAGGCTGAAGAAATATTGAATAACACAC
CAGATGCCTATATCCTTCAACAATTTGACAATCCCGCCAACCCCAAGATACACTATGAAACAACGGGTCCAGAGATCTGGGAAGACACAA
AAGGCAAGATTGACATACTTGTTGCTGGCATTGGAACTGGCGGAACCATTACAGGAACAGGCCGATTCCTTAAAGAGCAAAATCCAAACA
TTAAGATTATTGGTGTGGAGCCCACAGAAAGTAACGTTCTATCAGGGGGCAAACCTGGCCCTCACAAAATTCAAGGGATTGGAGCAGGTT
TTATTCCAGGAAACTTGGATCAAGATGTCATGGATGAAGTGATAGAGATATCGAGTGACGAAGCTGTTGAAACTGCGAGAACCTTAGCGC
TACAAGAAGGGTTGTTGGTTGGGATTTCTTCCGGAGCAGCTGCTCTTGCTGCCATTCAGGTTGGGAAGAGACCTGAGAATGCAGGAAAGC
TTATTGGGGTTGTATTTCCAAGCTATGGGGAACGATACCTCTCCTCTATTCTTTTCCAGTCAATACGAGAGGAATGCGAGAAAATGAAGC
CAGAATTGTGAAGATCTTCCTTTCTTTGAGCTATCTTCTGATTCTTAATAATCGTATCTGGCTTTTCTAGCTCGCAAACTTTTGTTTGTT
ATATTTAGTTGGCTGGTGTATACAATAGATCAGGTATTAAGATGGTTCTCATAACAAAGATTAAACAATCTCATCGATTCGGTTTGAGGA
TTTTTTATTTGAATTGATCATGAAATTTACTCGCAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
pcs	plastidic cysteine synthase	cysteine synthase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E624588
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	199	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthK	74
2	22155	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthase_BS Cys_synthK	52
5	56417	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthase_BS Cys_synthK	45
1.1	101578	Pyridoxal-5&apos -phosphate-dependent enzyme beta subunit - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	70
2	118619	Pyridoxal-5&apos -phosphate-dependent enzyme beta subunit - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	43
5	129130	Pyridoxal-5&apos -phosphate-dependent enzyme beta subunit - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	38

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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