Sol Genomics Network

Unigene SGN-U293853

Unigene Basic Information

Unigene ID:	SGN-U293853
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	293853
mRNA sequence:	Length: 747 bp

>SGN-U293853 Solanum tuberosum #4 (1 members)
TAATCCACAACCTAGTATTGTTTGGGCTTCGTCAAGTTCTGTTTATGGATTGAATTCAAAAGTACCCTTTTCAGAAAAAGATAGAACTGA
TCAGCCTGCTAGTTTGTATGCAGCCACTAAAAAGGCTGGTGAAGAAATTGCTCATACATATAACCATATATATGGTCTTTCGATTACTGG
ATTGCGGTTTTTCACAGTATATGGACCATGGGGTAGCCTGATATGGCTTATTTTTTCTTTACAAAAGATATTTTGAGAGGGAAGGAAATC
AAGATTTTTGAGACATCTGATCATGGTAGTGTTGCTAGGGATTTTACTTATGTTGATGATGTGGTAAAGGGTTGTTTGGCAGCACTGGAT
ACCGCGAAAAAGAGCACAGGGAGTGGGGGAAAGAAGAAGGGTGCAGCCCAATTGAGGATTTATAATTTAGGTAACACAAAGCCGGTGCCT
GTTGGGAGACTTGTTAGTATTTTGGAGAAGTTGTTGAAGGTGAAAGCAAAGAAGAAGGTTATCCAAATGCCGAGGAATGGGGATGTGCCA
TTTACACATGCTAATATCACTTTGGCACATACGGAGCTGGGATATAAGCCCACTACTGATTTGGAAATGGGGTTAAAGAAGTTTGTGAAG
TGGTATGTTAGCTACTATGGTTCGAAGAAGAAGAAGAGTTCTTGGTGAAGTTCTTAAACTTGGTGTTGCGTTGTTTCTCTCTAATGTTCC
TGCGCGTTGATGATACTCTTCATTGAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E572280
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	22275	dTDP_gluc_dehyt GDP_mann_dehyd ADH_short GalE Epimerase_Dh 3Beta_HSD Nuc_sugar_epim	38
5	56480	dTDP_gluc_dehyt GDP_mann_dehyd ADH_short GalE Epimerase_Dh 3Beta_HSD Nuc_sugar_epim	38
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118686	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287) Nucleotide sugar epimerase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: racemase and epimerase activity acting on carbohydrates and derivatives (GO:0016857)	35
5	129150	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287) Nucleotide sugar epimerase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: racemase and epimerase activity acting on carbohydrates and derivatives (GO:0016857)	35

Preceding Unigenes (1)

Unigene	Build
SGN-U261980	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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