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This unigene is from an out-of-date build, Coffea canephora #1
It has been superseded by SGN-U614458 in the current build, Coffea canephora #3

Unigene SGN-U305759

Unigene Basic Information

Unigene ID:	SGN-U305759
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	127657
mRNA sequence:	Length: 126 bp

>SGN-U305759 Coffea canephora #1 (1 members)
GACTACGTTTTTTCCAAACTTTTTTGGGATCCAATAATTCACCACCTGATCAATGCATTCCTGAAATTGCGTACTTTATTATACAGCAGC
ATGTTGAAGCTCCTTCAATGTGGTCAATTTTTCCTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs30w	Endosperm and perisperm 30 week after pollination	12592	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E647789
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 1 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|41176619\|gb\|AAR99599.1\|	170.6	8.6e-42	68.1	348 bp (276.2%)	1
Description:	4-alpha-glucanotransferase [Solanum tuberosum]
arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P104147 (121 Aa)

RLRFFQTFLGSNNSPPDQCIPEIAYFIIQQHVEAPSMWSIFPVRDLLALKEEYATRLAVEETINDPTNPKDYWRYRVHVRFYSLVRDKDL
MTVMEDLVRGSGRSYPLQDPEVSEGKGTVPX

SignalP predicts non-secretion with a score of 0.116

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1176	Glyco_hydro_77	16
2	24084	Glyco_hydro_77 Eclosion EF-hand CBD_4	9
5	58144	Glyco_hydro_77 Eclosion EF-hand CBD_4	9

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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