Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U578153, SGN-U580410, and SGN-U580547 in the current build, Tomato 200607 #2

Unigene SGN-U312299

Unigene Basic Information

Unigene ID:	SGN-U312299
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312299
mRNA sequence:	Length: 1306 bp

>SGN-U312299 Tomato 200607 #1 (28 members)
GCCTCCTCCACAAAAGGAAGAGGTGCCTTATAGCTTACTGTCTTCTTTTCCTTTGTCCTTGCATTTGCATTCATCTGTGATCATACTAAC
AAAAAAATTAAAAAAAAGTTAAAAACACAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCAACGTTAGATTCCAAGGTCACCCAATGA
AATTAGTCGAGCTAGAGGGTTCCCACACCGTACAAAACATCTACGATTCATTGGATATCCATGTTGGTCAGTGCCTCTCAGTATTGGTGA
CTGCTAATCAGGAGCCCAAGGACTATTACTTGGTTGTTTCAAGCAGGTTCTTGAAGCAAGAACTCTCCTCTGTGGCCATCATCCGTTATG
CCAATGGAAAGGGCCCAGCATCTCCTGAGCTCCCAGCATCCCCACCAGACAACACTGAAGGCATTGCCTGGTCCATGAACCAGTTCCGCT
CCTTCAGATGGAACTTGACCGCTAGTGCTGCCCGTCCCAACCCTCAGGGTTCCTACCATTACGGACAGATCAACATCACCCGCACCATCA
AGATTGTCAACTCTATGGGCCAAGTAAATGGTAAGCTTAGATATGGTTTGAACGGTATCTCTCACTCAGATACCGAAACTCCATTGAAGC
TTGTAGAGTACTTTGGAGCTGCCGATAAGAGCTTCAAGTATGATCTCATGGCTGATGAAGCCCCAGCTGACCCAAGCAAGCTAACTGTTG
CCCCAAATGTGAAAAACACCACCTACCGTAACTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGCATCAGGACATATCACCTTGACG
GATATTCCTTCTTTGCAGTAGCTGTTGAGCCAGGGAGGTGGAGCGCAGAGAAGAGAAAGAACTACAACTTAGTGGACGCAACAAGCAGGA
ACAACATCCAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGGAACTTGAGGTCAGAGATGTGGG
AGAAGACTTATTTGGGAGAGCAAATGTACTTCAGCGTTCTCTCACCAAGCCGCTCCTTGAGAGATGAATACAACCTCCCTGATAACCATC
CTCTCTGCGGTGTTGTCAAGGGCATGCCCCTCCCAGCTCCATACAAGGCTTAATTTAATCTCTTCTCTTTCTATCTAATAATAAAGGGGA
CGGCTTAACTATTAATGGATTCCATGTATTTGTTTTCCTTCCCCCCAAAAAATCAATGAATAAAAAGTTTTTTCTTTCATTCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
lat51	anther-specific LAT51

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	8
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	8
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101438	Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507)	162
2	118466	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	111
5	128966	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	105

Preceding Unigenes (1)

Unigene	Build
SGN-U212691	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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