Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579878 in the current build, Tomato 200607 #2

Unigene SGN-U312644

Unigene Basic Information

Unigene ID:	SGN-U312644
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312644
mRNA sequence:	Length: 2367 bp

>SGN-U312644 Tomato 200607 #1 (66 members)
CTTTATTCATTTTCTACTCTCTTCTTCTTTCTACCGCCGCCGTCTAGCATTCATTTGATACATTTTTTTTTGGTTTTTTTCCGTCGTCAT
GGCCGGGAAAGGTGAAGGTCCGGCGATCGGTATAGATCTAGGAACTACTTACTCTTGCGTTGGAGTTTGGCAGCATGATCGTGTTGAGAT
TATTGCTAATGACCAAGGGAACAGGACGACTCCTTCTTACGTTGGTTTTACTGATTCTGAGCGTCTCATTGGCGATGCTGCTAAGAATCA
AGTCGCCATGAATCCTATTAACACCGTGTTTGATGCCAAGCGTCTTATTGGAAGGAGGTTCAGTGATGCCTCTGTACAGAGTGACATCAA
ACTGTGGCCTTTTAAGGTTACTCCTGGACCTGGTGACAAGCCAATGATTGTTGTTAACTACAAGGGAGAAGAGAAACAGTTTTCTGCTGA
AGAAATCTCTTCCATGGTTCTTATTAAGATGAAGGAAATTGCCGAGGCCTTCCTTGGGTCAACAGTGAAGAATGCTGTGGTTACTGTGCC
TGCATACTTCAATGACTCGCAACGTCAGGCTACTAAGGATGCTGGTGTCATATCTGGCTTGAATGTCATGCGTATTATTAATGAGCCCAC
AGCAGCTGCCATTGCCTATGGTCTTGACAAAAAGGCCACTAGTGTTGGTGAGAAGAATGTTCTTATCTTTGATCTCGGTGGTGGTACCTT
TGATGTGTCCCTCCTCACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCAGGAGACACTCACCTTGGTGGTGAAGATTTTGATAA
CAGAATGGTGAACCACTTTGTCCAGGAATTTAAAAGAAAGCACAAGAAGGATATCACCGGTAACCCTAGGGCCCTTAGAAGATTGAGGAC
AGCTTGTGAAAGAGCAAAAAGAACTCTTTCCTCCACTGCCCAGACAACAATCGAAATTGATTCCCTATATGAGGGAGTTGACTTCTATTC
AACCATTACTCGTGCCAGATTTGAGGAGTTAAACATGGATCTTTTCAGGAAGTGTATGGAGCCTGTAGAGAAGTGTTTGAGGGATGCCAA
GATGGACAAGAGCTCTGTACACGATGTTGTTCTTGTTGGTGGTTCCACCAGAATTCCCAAGGTACAACAGCTGTTGCAAGACTTCTTTAA
TGGAAAGGAGCTTTGCAAGAGTATCAACCCAGATGAGGCTGTTGCCTATGGTGCTGCTGTTCAAGCTGCTATTCTCAGTGGAGAGGGTAA
TGAGAAGGTACAAGACTTGTTGCTTTTGGATGTCACCCCTCTATCTCTTGGATTGGAAACTGCTGGAGGAGTCATGACTGTCTTGATTCC
AAGGAATACCACCATTCCTACCAAGAAAGAGCAGGTGTTCTCTACCTATTCTGACAACCAGCCTGGAGTGTTGATTCAGGTTTACGAGGG
TGAGAGAGCAAGGACCAGAGACAACAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCTCCTGCTCCTAGGGGTGTGCCTCAGATCAC
GGTCTGCTTTGACATTGATGCCAATGGCATCCTGAACGTCTCAGCTGAAGACAAGACCACTGGACAGAAGAACAAGATCACTATTACCAA
TGACAAGGGTAGGTTATCAAAGGAAGAAATTGAGAAGATGGTCCAGGAAGCAGAGAGGTACAAGGCAGAGGATGAAGAGCACAAGAAAAA
GGTTGAGGCCAAGAATGCACTTGAGAACTATGCCTACAACATGAGGAACACTATAAAGGATGATAAGATTAGTTCTAAGCTTAGTGCAGA
CGACAAGAAAAAGATTGAGGATGCCATTGATCAGGCAATTTCATGGCTTGATAGCAACCAGCTTGCTGAAGCTGATGAGTTTGAAGATAA
GATGAAGGAACTGGAGAGCCTATGTAATCCCATAATTGCAAAGATGTACCAGGGTGCTGGTGGTGAGGCAGGTGCACCTATGGATGATGA
TGATGCTCCTCCAGCTGGTTCTACCGGTGCAGGCCCCAAGATTGAGGAGGTCGATTAAGTGTGAACAGTTCTAGTTTTATTCTCAGTATA
AACTATTCTATTATATTTGGTACTTTTTTATGTTTTTGCTATATCGGTTTCGTCTATTTATTAAGCTGTTGAATGTTGATGGCTCTTTAT
ATGAGTTCCATCGATTTTGAATTTTAAATGACTATCCGTTGTTTGGAAACAAAAAAACTGAAAAAAAAAAAAAAAAAGCTCTTATCTGGC
CTACGACTTTGTATTACTGGTCTATATTTTCCAAGTTAATACGGTGGAAAAGATATTTGAGAACAGCTTATATGGGAAAGAAAAAATTGT
TACAACTTTTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	8
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	7
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	10
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum lycopersicum	cTSB	seed	1880	3
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	4

mRNA member sequences (66)

Alignment image suppressed for unigene with 66 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101444	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	154
2	118449	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	129
5	128965	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	105

Preceding Unigenes (1)

Unigene	Build
SGN-U213204	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer