Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579712 in the current build, Tomato 200607 #2

Unigene SGN-U312950

Unigene Basic Information

Unigene ID:	SGN-U312950
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312950
mRNA sequence:	Length: 2105 bp

>SGN-U312950 Tomato 200607 #1 (16 members)
TTTTCTTATATAAAAAACATATCATCTTCTTATTGTTATTTTAACTACCACATTTGAAGCCGGAAAACTTAGTAACACGATGGCCGGTGG
AGGATTTACGACCTCCGGTAACGGAGGCACGCATTTCGAGGCTAAAATCACACCAATTGTTATCATATCTTGTATTATGGCTGCTACCGG
AGGTCTCATGTTTGGTTATGATGTTGGAGTTTCTGGTGGTGTTACATCAATGGATCCATTTTTAAAAAAATTCTTTCCAACAGTTTATAA
GAGAACAAAGGAGCCAGGATTAGACAGTAATTACTGTAAATACGATAATCAAGGGTTACAATTATTTACTTCATCGTTATACCTAGCTGG
TTTAACGGCGACGTTTTTTGCTTCTTACACTACAAGAAAACTTGGCCGGAGATTAACTATGTTAATCGCCGGTTGTTTTTTCATTATTGG
AGTTGTACTAAATGCTGCTGCTCAAGATTTAGCTATGCTTATTATTGGAAGAATTCTCCTTGGTTGTGGCGTTGGTTTCGCCAATCAGGC
TGTTCCATTATTTTTATCAGAAATAGCACCTACAAGAATTCGTGGAGGACTTAACATTTTGTTCCAACTTAACGTAACTATTGGTATTCT
TTTTGCCAATCTCGTCAACTACGGAACAGCCAAGATTAGTGGAGGATGGGGATGGAGATTATCATTAGGGTTAGCTGGATTTCCAGCAGT
ATTGTTGACTTTGGGCGCATTATTTGTTGTTGAAACCCCAAACAGTTTGATTGAAAGAGGTTACTTAGAAGAAGGCAAAGAAGTACTTCG
AAAAATCAGAGGTACCGACAACATTGAACCTGAATTCTTGGAACTTGTTGAGGCTAGTCGTGTTGCTAAACAAGTCAAACACCCTTTCAG
AAATTTACTCCAACGTAAAAATAGACCTCAATTAATCATCTCTGTTGCCCTCCAGATATTCCAACAATTTACAGGAATCAACGCTATTAT
GTTCTACGCACCTGTTTTATTTTCAACACTAGGGTTTGGAAACAGCGCAGCTCTTTACTCAGCTGTCATCACCGGAGCAGTCAACGTTCT
CTCCACCGTTGTCTCAGTCTACTCCGTTGACAAGCTCGGACGACGAGTCCTCCTCCTGGAAGCTGGGGTCCAAATGTTACTATCTCAAAT
AATAATCGCTATAATCCTAGGTATCAAAGTTACTGATCATTCAGACAACCTTAGCCATGGTTGGGGAATCTTCGTAGTAGTTCTGATCTG
TACATATGTATCGGCTTTCGCATGGTCATGGGGCCCACTTGGATGGTTAATTCCTAGCGAGACGTTCCCTTTGGAAACTCGTTCAGCTGG
TCAAAGTGTAACAGTGTGTGTTAACTTGCTTTTCACGTTTGTTATGGCACAAGCATTTCTCTCAATGCTTTGTCATTTCAAGTATGGGAT
ATTCTTGTTCTTCTCGGGGTGGATTTTTGTGATGTCGTTGTTCGTTTTCTTCTTGTTGCCTGAGACGAAGAATGTTCCTATTGAGGAGAT
GACGGAGAGGGTGTGGAAGCAACATTGGCTGTGGAAGAGGTTTATGGTGGATGAAGATGATGTTGATATGATTAAAAAGAATGGACATGC
TAACGGATATGATCCCACTTCTCGGTTGTAAAATAAAAAATAAAAGAATATTAGCGGTGTTTTACGTTGATTTTATCATAGTAAAGATGC
GTAGAAATAAATCAAACATGCAAGAGAGAGATCAGAGTCTACTGTCTAGTCTAGTGATATCGATAAGTGTTTCTCACAAAATAGGTGTGC
ATTTGGATTTTTTTTACTGCTTGTTTTCCTCCTTTATATCGTTCAATGTAGTAGAAATTGTTTAGCCAAAGTGTAAGAGATGCAATATGG
TGATAATTTATGTAACCATATAGCCTATGTATATTAGAGATTTGGTATAATTCATTTTGGGAAAGCACTTTGATATGTTTAATTTCTTGT
TATGTATGTATGACAAGGTGTCTAGTTATAATGATAAGGCCCAATAGAGGTTTGCATGTTGAGTATTGAGACACAAAAATGAAAAAAAAT
TACGCTCAATGATCTTGAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ht2	Sugar transporter protein 2	Transports glucose

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	vSlycmRNA		8362	3

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (1)

Annotations (manual: 3 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101430	Major facilitator superfamily - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021)	189
2	118452	Major facilitator superfamily - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021) Sugar transporter - Molecular Function: sugar porter activity (GO:0005351) - Biological Process: carbohydrate transport (GO:0008643) - Cellular Component: membrane (GO:0016020)	124
5	129116	Sugar transporter superfamily - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020) Sugar transporter - Molecular Function: sugar porter activity (GO:0005351) - Biological Process: carbohydrate transport (GO:0008643) - Cellular Component: membrane (GO:0016020)	39

Preceding Unigenes (2)

Unigene	Build
SGN-U213232	Lycopersicon Combined #3
SGN-U229995	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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