Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578593 in the current build, Tomato 200607 #2

Unigene SGN-U313003

Unigene Basic Information

Unigene ID:	SGN-U313003
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313003
mRNA sequence:	Length: 2302 bp

>SGN-U313003 Tomato 200607 #1 (22 members)
GATTATAGAGTTCAAACAGAGGTCAAAAAAACAAAATTTAGTACAATTGCTTGACAAGTCAGAATAATTTTGCCAAAATTTGATCAAGAA
CTACTTGGCCTTTGATAATGTTTGGAAATGGAGTGGTTGGTATACTCTCAGAGGCAACCAACAAGTGGGAAAGACGGGCTCCGCTGACTC
CTTCACACTGTGCTAGACTGCTGCATGGTGGCAGGGGTAAGACCGGGGTGTCACGTATCATTGTGCAGCCATCTACGAAGCGCGTTCATC
ATGATGCTCTCTATGAAGATGTTGGATGTAAGATATCGGAGGACTTGTCGCAATGTGGTCTCATCTTGGGTATCAAACAACCCAAGTTGG
AGATGATTCTTCCTGATAGGGCCTATGCCTTCTTCTCCCATACTCACAAGGCACAAAAGGAAAATATGCCTTTGTTGGATAAGATCTTAG
CTGAAAGGGCATCTCTGTTCGACTATGAGCTTATAGTTGAAGACACTGGAAAGAGGTTACTTGCATTTGGTAAATTTGCTGGTAGAGCTG
GAATGATTGATTTTCTACGTGGATTGGGACTCTGGTATCTCAATCATGGCTACTCAACACCTTTTCTCTCACTCGGCTCATCTTACATGT
ACTCTTCATTGGCTGCGGCTAAGGCTGCAGTGATTTCTGTTGGTGAAGAGATAGCAACTATGGGACTTCCATCGGGAATCTGTCCACTTG
TATTTGTTTTCACTGGTTCTGGAAATGTGTCTCGTGGTGCACAAGAAATTTTTAAGCTTCTTCCTCATACATTTGTGGATCCAAGAAAAC
TTCCAGAGCTACATGAGATGGCCAGGGATCTTACTCAATCGAAGCAACCATCAAAGAGAATCTTTCAAGTGTATGGTTGTGTAGCAACCT
GCCAAGACATGGTGGAACATTTAAAACCTTCAAAATCTTTCAATAAGGCTGATTACTACACACATCCAGAGCAATACAAACCTGCTTTCC
ATGAGAAAATAGCTCCTTATGCATCTGTCATAGTAAATTGTATGTACTGGGAGAGAAGGTTTCCTAGGTTGTTAACTACTAAACAGATTC
AAGACCTTATGAAAAATGGATGCCCACTTGTTGGAATCTGTGACATAACTTGTGACGTGGGAGGGTCAATTGAGTTCATCAACCAAACCA
CATCTAAAACCTCAAAATCTTTCAATAAGGTATGAACCTTTCAACGATTCGTATCATTATGACCTAGAAGGTAAAGGTGTGATGTGTTCA
GCTGTAGATATTCTTCCCACTGAGTTTGCGAAAGAGGCATCCCAACATTTCGGAGATATTCTGTCCCACTTTATTGTAAGCTTAGCTTCC
TTTAGAAATCTTGAAGAGTTACCTGCACACTTGAAGAGAGCTTGCATAGCCCATTATGGAGGTCTTACTCAGTTGTATGAATACATACCT
CGAATGCGGAAATCTGATCTAGATGACCCTTCAATAGTTCTTTCAAATTCCAATGGGAACGGGAGGAAGTACACCGTATTGGTATCTCTA
AGTGGTCATTTGTTTGATAAATTTCTCATAAACGAGGCGTTGGATATTATTGAAGCAGCAGGTGGCTCCTTCCACTTGGTGAAGTGCCAA
GTTGGTCAAATCACAACTGATTCGTCATACTCAGAATTGGAGGTTGGAGCTGAAGATAAATCTGTTTTAGATAAAATAGTCGATTCTTTA
ACTTCCCTTGCTAATTCAAGCAACTCTTTGGGATCTCAAGACAAGGAAAACAACATATCTTTGAAGGTTGGGGAATTCCAAGAAACAATC
ATGGATGAGAAGTATGATTCAAAGAAGGTCTTAATTTTAGGTGCTGGTCGGGTTTGCAGACCAGCTGCAGAACTTTTAGCGTCAATTGGT
AGCACGACATCTAGGCAATTTCCTAAATCATCTGTAACGGCTGATTTTGAAGAGCAAAATTGTGTCCAAGTGATTGTTGGTTCTTTGTAC
TTGAAGGATGCGGAGGAGGTTACTAAAGTTATTCCAAATGCAAAAGCAATTCAGCTTGACATTACGAGTCACGAGTCTCTTTCTAGCTGG
ATCGCAGAGGTTGATGTTGTCATCAGCTTACTGCCTCCTAGCTGCCATGGTGTTATAGCAAAGGCATGCATTGAGCTGAAGAAACATCTC
GTCACGGCTAGCTACGTTGATGATTCTATGTTAAAGCTAGACCAAGATGCAAAATCTGCTGGAATTACTATTCTTGGTGAAATGGGCTTG
GACCCAGGAATAGATCATATGATGGCGATGAAAATGATCAACGAAGCCCATG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102548	Alanine dehydrogenase/PNT C-terminal - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Saccharopine dehydrogenase Alanine dehydrogenase/PNT N-terminal - Molecular Function: oxidoreductase activity (GO:0016491) LOR/SDH bifunctional enzyme conserved region	13
2	119863	LOR/SDH bifunctional enzyme conserved region Alanine dehydrogenase/PNT N-terminal - Molecular Function: oxidoreductase activity (GO:0016491) Alanine dehydrogenase/PNT C-terminal - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Saccharopine dehydrogenase	12
5	132043	LOR/SDH bifunctional enzyme conserved region Alanine dehydrogenase/PNT N-terminal - Molecular Function: oxidoreductase activity (GO:0016491) Alanine dehydrogenase/PNT C-terminal - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Saccharopine dehydrogenase	6

Preceding Unigenes (2)

Unigene	Build
SGN-U213374	Lycopersicon Combined #3
SGN-U238388	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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