Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579359 in the current build, Tomato 200607 #2

Unigene SGN-U313100

Unigene Basic Information

Unigene ID:	SGN-U313100
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313100
mRNA sequence:	Length: 1270 bp

>SGN-U313100 Tomato 200607 #1 (3 members)
GTCTTACCAGATCTCGTATGTGGTAGGACAAGAAGGTGATAGCGATATCGGATTAGATGACATTAAGGCTAATGCTAGTAAGTTGAGTTT
TGAAAACTCAAAGATTCGCGATGCTTATATCGCGTTGCAGTATTGGAAAACAGCAATGTTTTCTGATCCTTTTAACTTCACAGCTAATTG
GACAGGTCCAAATGTGTGTTCCTATGGTGGAGTGTTTTGTGCTCCTTCGTTAACGGATGATTCGATTAGAGTTGTAGCTGGCATTGATCT
TAATCATGCTGATATTGCTGGTTCATTAGTTGCAGAACTTGGTCTTCTTACAGATCTGGTTCTTTTCCATCTCAACTCGAATCGTTTTTG
TGGAGTTGTACCAAAAACCTTTAGCCATTTGAAGCTTCTTAGGGAGCTTGATTTGAGTAATAATAGGTTTGTTGGTGGGTTTCCTAAGGT
AGTTCTTTCACTACCTTCTTTGAAGTTTTTGGATCTAAGGTTTAATGACTTTGAAGGACCAGTTCCTTCAGGACTTTTCGATAAAGATTT
GGATGCGTTGTTTTTGAATGACAATAGATTCCGTTTTGGCATCCCGGAGAACTTGGGTAACTCTCCTGTTTCGGTTCTTGTGTTTGCTAA
TAACGATCTTGGAGGGTGTATTCCCGCAAGTATTGGGAAAATGGGGAAAACGTTGAATGAGTTGATATTGATGAATGATAACCTCACTGG
GTGTTTGCCAATGGAGATTGGATTGTTGAACAAGTTAACCGTGTTTGATGTTAGCTTCAACAAGATTCAAGGCTCATTGCCATCAACTGT
GAGCAAAATGAGGAGTGTGGAGGAACTGAATGTGGCTCACAACAAGCTTACTGGGGTTATACCAGCTAGCATTTGCCAACTTCCTAGGTT
GCAAAACTTTACGTATTCCTTCAATTACTTCACCGGGGAAGCTCCAGTTTGTGCTGCGACTAGATCTGGTGACGGCCAGGAGAACTGTAT
CGTTGGAAAGAAGAATCAAAGATCTGCTAAAGAATGCTCTTCGGATGATGCAAAACCGTATGATTGTAGGAAATCCAAGTGTTATAGCCC
TTTTGCTACATCTCCTTCGACAAAGCCAAAACCAAAACCAAAGCCAAGAGGCCCACCACCACCTACTTGGAAGTCTTCGGGTTCGCATAA
CAAGCGATCTCCGNCGCCACCTAAATCAACTCCTCTTCCTTCACCAGCACCTTACAAAAAGTCCCCAACCTATCAACATAGAAGTCCACC
ACCACCTACT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
X55687	entensin X55687	extensin

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128948	Leucine-rich repeat Leucine-rich repeat plant specific	155

Preceding Unigenes (1)

Unigene	Build
SGN-U230830	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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