Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U583117 in the current build, Tomato 200607 #2

Unigene SGN-U313182

Unigene Basic Information

Unigene ID:	SGN-U313182
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313182
mRNA sequence:	Length: 1884 bp

>SGN-U313182 Tomato 200607 #1 (64 members)
ATCCTCAAAAAGCAAATGGGGTGCGCCTCCACTATGACTATCATTATTCTCTCTTGAAAAAAGAAATTTTCATTAATTTTTCTTTAATTC
AGGGATATTTTTCAGCTATGGAGTTAGGTGACAACAAGATTTTGAATGTGGGGTTGCTTTTAGTTGCAACCCTTTTGGTAGCAAAGCTCA
TATCTGCACTAATTATGCCCAGATCTAAGAAACGTTTGCCTCCAGTGGTTAAGGCATGGCCTATTGTTGGTGGGTTGATCCGTTTTCTTA
AAGGGCCAGTTGTGATGCTTAGACAGGAGTATCCAAAGCTTGGGAGTGTGTTTACTCTGAATTTGTTGAACAAGAACATCACATTCTTCA
TTGGTCCAGAAGTTTCTGCACATTTTTTCAAAGCCCCAGAAACAGATCTTAGCCAACAAGAGGTTTATCAGTTCAATGTGCCTACCTTTG
GACCTGGTGTGGTTTTTGATGTTGATTATACAATTAGGCAGGAACAGTTCAGGTTCTTTACTGAAGCTCTCAGAGTCACTAAGTTGAAGG
GCTATGTAGATCAGATGGTTACAGAAGCTGAGGAATACTTCTCGAAATGGGGTGAGAGTGGTGAAGTAGACCTAAAATATGAACTGGAGC
ATCTTATCATATTGACAGCTAGTAGATGTCTGTTGGGAGAAGAGGTCCGCAATAAACTCTTTGACGATGTGTCTGCTCTCTTCCATGACC
TGGACAATGGGATGCTCCCTATCAGTGTTATCTTTCCCTACCTTCCAATTCCAGCCCATCGCCGACGTGACAATGCCAGGAAGAAGCTAG
CAGAGATCTTTGCAAACATCATAAATTCTCGAAAACGTACAGGCAAGGCAGAGAATGATATGTTACAATGCTTCATTGACTCAAAGTACA
AAGATGGACGGCCAACAACAGAGGGTGAGATCACAGGTCTTCTGATTGCTGCTCTTTTCGCTGGGCAGCACACCAGTTCGATCACTTCCA
CTTGGACAGGGTCATACCTCCTCACCAACGACAAGTACATGTCGGCTGTTGTAGATGAACAGAAGAATCTGATGAAGAAACACGGGAATA
AGGTTGATCACGATATCCTTTCCGAGATGGAAGTCCTCTACAGATGCATAAAGGAAGCCCTCAGACTCCATCCTCCACTGATAATGCTTC
TGCGTAGTTCACATAGCGAATTCAGTGTTACAACCAGAGAAGGAAAAGAGTATGACATTCCCAAGGGACATATCGTTGCAACCTCACCTG
CTTTTGCAAACAGGCTGCCACATATCTTCAAGAATCCAGATACTTACGACCCTGATAGGTTCGGCCCTGGTAGAGAAGAAGATAAGGCTG
CAGGAGCATTCTCATATATTTCTTTTGGTGGAGGCAGACATGGTTGTCTTGGAGAACCATTTGCTTATCTGCAGATTAAAGCAATATGGA
GTCACTTGCTGAGAAATTTCGAGTTTGAACTGATCTCGCCTTTCCCTGAAATTGACTGGAACGCTATGGTTGTCGGTGTCAAAGGGGAAG
TAATGGTGAAGTACAAGCGCCGAAAGCTCTCTGTTGAATAAGCAGATAACATCTGCATGAATGTGGTAGTTTAAGATCATTTATGTTGGT
TTGTTAAACCTTATTTCTTGTTTAATGTTGACTTCTATGTTTAATGTTAGTCCTGTTTCTCTTGAAGATTGCAATGACTAAGATTATATT
ATTAGAGTAAAAAAAAAAAAAAAAGTTTGTGTTTTCTTCCATTGGATTTTATCATATTCTCACTAACAATAAGTTAATTCAAACTGTACA
GGAAGTTATCTTCTGAAAAGGTTTAAGTTTGCATTATATTCATTATGCAATCTACCATATGTTTTCCAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (24)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	8
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	8
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	6
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTSC	seed	2256	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (64)

Alignment image suppressed for unigene with 64 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	120286	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	9
5	130572	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U213923	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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