Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U572540 in the current build, Tomato 200607 #2

Unigene SGN-U313701

Unigene Basic Information

Unigene ID:	SGN-U313701
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313701
mRNA sequence:	Length: 2055 bp

>SGN-U313701 Tomato 200607 #1 (70 members)
TTGTTCTTATTTAGTTGTCCTTTCCTCTCATCAACATATAAAAAAAAAAATTAAAAAAAAAATTGTGTTTTTTTTTTATATGTTAAACTC
AAAAAGAGGGAGAGAAAAAAAAATTTTAATTAGCAAAAGATGAATAAACAAATAGTAAGTTTTGTTCTTCTTTTGCTCTTTTCATGTAAT
TTGGTATATGGAGAAGATCCTTATATTACTTATGAATGGAAAGTTACTTATGGTACTCTTTCACCACTTGGTGTACCACAACAAGTTATT
TTAATTAATGGTGAATTCCCAGGACCTAAAATTAATTGTACATCAAACAACAACATTGTTGTAAATGTTGTCAATGAATTAGATGAACCA
TTTCTAATTACATGGAAAGGGATTCAACAAAGGAAGAATTCATGGCAAGATGGTACATTAGGGACAAATTGCCCTATCCCTCCTGGTAAA
AACTTTACTTATCGTTTCCAGGTCAAGGATCAGATCGGTAGTTATTATTACCACCCTACAACCGCGCTACATAGGGCAGTTGGAGGGTAT
GGTCCTCTAACTATACATAGTCGCGCTTTGATCCCTGTCCCATTCAATCCCCCGGCTGATGATTTCACCGTTCTTGTGAGTGATTGGTAT
ACTAAAACTCATAAAACATTGAAAGGTCTTTTAGACACAGGACGTTCGCTAGGAAGACCAGAAGGGATTGTTATAAATGGTAAAAGTGGT
AAAGGTGATGGTAAAGACGCGCCGATGTTTACATTGGTTAAAGGTAAGACGTATAGGTTTAGGTTTTGTAACGTCGGTATGAAGGATACG
ATCAATGTTCGATTTCAAGGACACACAATGAAACTTGTGGAAATGGAAGGATCTCACACTGTTCAAAATATGTATGAAATGTTGGATATT
CATTTGGGACAATGCTTATCTGTCTTGATCAATGCTGATCAAAACCCTAAGGACTATTACCTTGTTGCCACTTCACGTTTTACTAAGGAA
TCTCATTTCGCCACCGCGACACTCCGTTACGTCAACGGTGTAGGTGGGGCCGCCCCTCTTGAAAAGAAAGAAGCACCAGAAGGATGGGAA
TGGTCATTGAACCAATTCAACTCATTCCGATGGAATTTAACCGCGAGTTCAGCTAGACCTAATCCTCAAGGTAGTTACCACTACGGTCAA
ATCAACATCACCCGGACCATTAGGTTGGTGAGCACCGATGGCGTTGTGAACGGTAAACAGCGTTACGCAATCAACGGTGTGTCACACACG
GATCCCGAGACACCGATTAAGTTGGCTCAATATTATGGTGTTGCGGACAAGGTGTTTAAATATGGGCTATGTAAGGATGAGTATATGCCA
CCAAATGGAAATGAAGTAATCACAATTGCACCTAATGTTGTTAATGTTACATATCGCAATTTTGTTGAAATTATATTTGAAAATCATGAG
AATAGTGTTCAATCTTGGCAATTAGATGGATTCAACTTCTTTGCCGTTGCGATCGCACCGGGGAGATGGAAGCCAGAGATGAGACAAAAC
TACAACTTACTTGATGCTGTGAGTAGGAGTACAATCCAAGTGTACCCAAATTCATGGGCTGCAATTGTAACAACACTTGACAATGCTGGG
GTTTGGAATTTAAGGTCCAATGCACTTGAAAAACAATATTTGGGCCATCAACTATATTTAAGTGTTAATGCACCAAACACATCATTGAAA
GATGAGTACAACATGCCTGATAATGAATTGTTGTGTGGAATCATCAAGGGTTTGCCTCGTCCAAAACCTTACTCCATATAAGTACGAACC
GATCGATCGAGTGAGCAAGCGATATGTGATATTATGTAACGATGGTTTTATGAACCAGCATTTTTTGTTGTTGTTGTTGTGGTATGAATT
GATTAATTACTAGGATTTTATTCTCAATTGTACATCCAAGAAAAATCAATGTATTTATGATTCTTTTTCATGTATCAAATGATGATTTTT
CTGAATGATTTTGTAGAAAAAATTCTACCTTATGTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	66
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1

mRNA member sequences (70)

Alignment image suppressed for unigene with 70 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101438	Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507)	162
2	118466	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	111
5	128966	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	105

Preceding Unigenes (1)

Unigene	Build
SGN-U213539	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer