Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U579757 and SGN-U581126 in the current build, Tomato 200607 #2

Unigene SGN-U313827

Unigene Basic Information

Unigene ID:	SGN-U313827
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313827
mRNA sequence:	Length: 646 bp

>SGN-U313827 Tomato 200607 #1 (3 members)
TCACGCTTTTTTATTGTTTCTCTCTCTTTGGGTCTTGTAAACCCTAACAACAGAAGAAAAGGGAGATATCTTTGGAGGTGGGCGGCCACT
ATTTATATTTAAGTTCCAGTGAGGTTATTGGAGACTGAAGTTTGAGATGGCTGCTATTTTAACTGCATCATCTGGTCCAAGCTATGCACC
AGAAGACCCCACTCTCCCCAAACCTTGGAAAGGCCTAGTTGATGGTACAACAGGATATATCTACTTCTGGAATCCAGAGACCAATGATAC
CCAATATGAGAGGCCTGTTCACTCATCCAATGGAGTGTCTGCTCTAGCACAAAAGTCAGCTGTATTTGTTAGTTCATCTGTCCAAAAACC
CTCTCAAGGTCAACATTATGATCCAGACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGAGATCAGAATGCGAG
AAGCAGTTCTGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGAACTGACATATCTCAAGAATCCTATTGCCGCCACAATGAGATCTC
TGTTACGGGAGGTGATGTTCCTGCACCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAGATGCGTCAAGCTGG
GTTTTCAGCTCCTACT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101393	DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	340
2	118423	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	248
5	128963	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	106

Preceding Unigenes (1)

Unigene	Build
SGN-U214868	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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