Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578054 in the current build, Tomato 200607 #2

Unigene SGN-U313850

Unigene Basic Information

Unigene ID:	SGN-U313850
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313850
mRNA sequence:	Length: 1693 bp

>SGN-U313850 Tomato 200607 #1 (7 members)
TCTCTTTCTCTCTCTTTGTAAAATAATGTTCCTTTGCGTAGCAGCAGTATACAATCGCCGTTGATTACACTACGGCGGTGGCTTCACATG
GAAGATGCGCTCAATCTCTCTTCCGTATCTCTCTAGTGTGTGCTGTCCTTGTTGCTTATCGTGCTCCACTTGCGTCGCCTCCTGATTCGG
TTGCAGGAAATTTCATCAGTTTTAGAAAGATCAACAGCTCCAAACTGGAGATTGACGGTAAAGTTATGTCGAAAGCTAGAGTTTACACCG
ATGTCAATGTGCTTCGCCCTAGAGAATATTGGGATTATGAAGCCCTTACTGTACAATGGGGTGATCAGGATGACTATGAGGTTGTTCGGA
AGGTTGGAAGAGGAAAATATAGTGAGGTTTTTGAAGGTATAAATGTTAACAGCAACGAGAAGTGCATAATCAAGATTCTGAAACCTGTTA
AGAAGAAAAAGATCAAGAGAGAGATCAAAATCTTGCAGAACCTCTGTGGCGGACCAAATGTTGTCAAACTCCTTGATATTGTCAGAGACC
AGCACTCAAAAACACCAAGCTTAATTTTTGAGTATGTGAACAGTACAGATTTCAAAGTACTGTACCCAACATTAACGGATTATGACATAC
GCTACTACATATATGAGCTTCTCAAGGCACTAGACTATTGTCATTCTCAGGGAATAATGCACAGAGATGTCAAGCCACATAATGTTATGA
TAGACCATGAGTTGCGGAAGCTTCGCTTGATAGACTGGGGTCTTGCTGAATTTTACCATCCAGGAAAGGAATATAATGTCCGTGTGGCTT
CAAGATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGATGCATGTTTGCAG
GAATGATCTTCCGCAAGGAACCTTTCTTCTATGGCCATGATAACCAGGATCAGCTTGTCAAAATTGCTAAGGTACTTGGAACTGATGAGT
TGAATGCATATTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTGGAGGCGATGGTTGGCAGGCACAGTAGGAAGCCATGGTCCAAAT
TTATTAATGCAGATAATCAGCATCTGGTGTCGCCTGAGGCTATAGATTTTCTTGACAAGCTTCTCCGTTATGATCATCAGGATAGACCTA
CTGCAAAAGAAGCAATGGCCCATCCTTATTTCTTGCAAGTGAGGGCTGCAGAGAATAGCAGGATGAGGACGCAATAGATGTTACTTTGGG
AAAGAGGGAGCTTATGGTGTAATGTTAGCAAATATTGTCATCTTCATCTATTTGAGATTATGGTATGGCAGAAGTTCATGATGGAACATT
TCATGAGCAATTGGTTTCATCAGTTTACCCCCTCATGGCCTTCTTCACTCTGCTGGTTATGAATTATCTTGCATTAGCCCTCCTGCTTTC
GTATCCAAAGTCGATTGTGTAATGTTTGAAAATTGAAATATACTGAAAAGCTTTGCCCTAGACACTGGCAATATATTCTAAGGTTGCATA
TGTTTTAACTCGAGATATAATCTTTAGTTTCCTTGTCTCTGGTTTGTTAGGATTTAGGAATTGATTGGCAAAAGATTACTTGGAGGGCAA
TGCCCGATGGTACTGTAATAGTTCAGTTTTATGGTATTCAAGTTAAGTTTCTTTTGTTATCCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	129820	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	15

Preceding Unigenes (1)

Unigene	Build
SGN-U213919	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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