Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563385 in the current build, Tomato 200607 #2

Unigene SGN-U313932

Unigene Basic Information

Unigene ID:	SGN-U313932
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313932
mRNA sequence:	Length: 1373 bp

>SGN-U313932 Tomato 200607 #1 (12 members)
CAACTGTTGCAACGATAATTTTTATGCTTTGTACTTTTGTCATCTTGATGAAGATGAGAAAGAGGAAGCTTATGCACAAAATTCAGAGTA
GACATGTGGACGATATTGATATTACTGCAGAATCCTTGCAGTATGATCTCTCTACAATTAGAGCAGCAACAGATAACTTCTCAAGTTCTA
ATAAGTTGGGAGAAGGTGGATTTGGTCCTGTGTACAAGGGTGTGCTTTCAAATGGACAAGAAGTAGCAGTCAAAAGATTGTCAGTAGATT
CAGGCCAAGGAGATCTAGAATTCAAAAACGAGGTCTTGTTGGTTGCAAGGCTTCAACATAGGAATTTGGTTAGATTGCAAGGATTTTGTT
TCGATGGAACAGAGAGACTTCTTGTCTATGAATTTGTTCCTAATGCAAGCCTTGACCAATTTTTATTTGATCCAGATAAACGTAAGCAAT
TGAATTGGGAAAAGAGATCCAAAATCATAGGAGGCGTTGCTAAGGGGATCCTTTATCTTCATGAGGATTCTAGGCTTCGGATCATTCATC
GTGATCTCAAAGCGAGTAATGTTCTACTCGATGCAGAAATGAATCCTAAAATCTCAGACTTTGGCATGGCAAGGTTATTTACGCTGGATG
AAACTCAAGGCAGCACAACCAGAATTGTTGGGACCTATGGATATATGGCACCGGAGTATGCAATGCACGGGCAATTCTCAGTCAAATCGG
ATGTTTTTAGCTTTGGAGTGCTAGTCCTTGAAATTATAAGTGGCCAAAAGAATACTTGTTTCAAAAATGGAGAATCAGTGGAAGACCTAC
TAAGCAATGCTTGGATGAACTGGCGCGAAGAAACAACTACAAATTTGATAGACCCCATGTTGAGGGAAAGCTCAGGAATGGCTCGTGACA
TAATGAGATGCATTCACATAGCATTACTGTGCGTTCAAGAAAATATTTCTGATAGACCAACCATGGCTGCAGTAGTTCTCATGCTCAGTA
GCCTATCCTTGAATCTTCCCCTGCCTTCAGGGCCTGCATACTATACACACAACGATATTACTTCAGGGATCTCACTTACTCAAGAATACA
ATTCAAGATCATCAGGACCTAGAGAATTAGCCAAAAGTAAATCTATTAGTTCATCACATAATGAGGCATCGATAACTGAGTTATCCCCTG
GTTAACATCCTTAGACATAATACCCTTCTTTCCTGAGTGTTGTGAATTAGTTTGTTGTTTGTTCCTAACTCTAGTTAGTCTAGAATTCAC
GAGATTGATTTATTAATTGTTTGTGTGCTTCATACAAAATTCCAACTTGTTTAATATGCATTAGTTATTACACTAATGAAACTGTCTATA
TAATTAGACTGAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	7

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 3 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128940	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	170

Preceding Unigenes (1)

Unigene	Build
SGN-U213786	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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