Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563389 in the current build, Tomato 200607 #2

Unigene SGN-U313935

Unigene Basic Information

Unigene ID:	SGN-U313935
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313935
mRNA sequence:	Length: 2276 bp

>SGN-U313935 Tomato 200607 #1 (22 members)
TTCACTGCACCCAGTCCATACGTTTTCTCTCTAACTCTGTTTCTAGGTTATACATATTCAGCACTAATATCAAAATTTGCTTGCAACTTA
AACAGACATAGCCATGGTAATTCAAAAGTGGTTACTCTTTCTGTTTCTGCATTTACATGTTCTCAATATTGTAGCCCAGCTGCCTCAGTT
ACGATTTGGTTCATGTGGTGAGAATGGTAACTATACTGAGAATAGTACCTACAAGAACAATCTAAACACACTCCTCACATCCCTTCCCTC
AAAAATAGATAACTATGGTTTCTACAATGCTTCCATTGGCCAAAACACCGATAGAGCCAGCGTTATTGTGCTGTGTAGAGGAGATGTGGA
GCTAGACGATTGCCGCGTTTGTGTCGATAATGTTGTTGAAAAGATTGGACAGTTGTGTCCTAACCAAAAAGAAGTTTTCGGTGGCTATGA
TGAATGTATGTTACAGTATTCAAATCAATCCATTATAGAAACTCCATCATTGTCTGTTCGATATTTTCTTTGGAATGCTGCGAATGCCTC
AAACCCCGAGGAATTTAACCAGGAGCTAAGACAATTATTGGAAAATTTACGAGACCGTGCTGCACAGGGTGGTCCTCTTCAAAAATATGC
TACTGGTAATACGGCAGCAGGTCTTCAGCCTATATATGCACTTGTGCAGTGTACTCCTGATTTATCTCGTCAGAATTGCTTCAATTGCTT
AACTGATGCTTATGGAAGCATGCCTCAATGTCCCTGCCTGGGGAAGATCGGTGGAAGAATCATAGGGGTTAGGTGCAATTTCCGTTATGA
AATTTCCCGTTTCTTCACCGCCGATGTGCCCATGGAAGCTCCGCCACCTGCTGGAAATGATAATAGAACAGTTCCAACAGGGACGGAAAA
TATTACACCTCCAACAGGGAAGGATGATAAAACATCACGAACAATCATCATAATCGTTGTGTCAACTGTTACAATTGTTATTCTTATGAT
TTGTATTGCTGTCATCTTGATAAGGAGGCGAAAGAGTAAGATGGTGAAGGAAATTCAGAGTACATCTGTGGATGATACTAGTATTGCAGA
ATCTTTTCAATATGCTTTTTCGGCAATTAGAGCAGCAACAGATGACTTCTCAGATGCTAATAAGCTCGGAGAAGGCGGATTTGGTCCTGT
ATACAAGGGTAAGCTTCAAAATGGACAAGAAGTAGCAGTGAAAAGGTTATCAGCAGATTCAGGCCAAGGTGATCTAGAATTCAAAAATGA
GGTCTTGTTGGTTGCCAAGCTTCAACACAGGAATTTGGTTAGGTTGCTGGGATTTTGCCTAGACCGAACAGAGCGGCTTCTTGTCTATGA
GTTTGTTCCCAATGCAAGTCTTGACCACTTCTTATTTGATTCAGTTAAACGTAGACAATTGGATTGGGAAAGGCGATCCAAAATCATAGG
AGGGATTGCTAAGGGGATTCTTTATCTTCATGAGGATTCTAGGCTTCGGATCATTCACCGTGATCTCAAAGCTAGTAATGTTCTACTAGA
TGCAGAAATGAATCCTAAAATCTCAGATTTTGGCATGGCAAGGCTATTTGAATTAGATGAAACTCAAGGCAGCACAAACAGAATTGTTGG
GACCTATGGATATATGGCACCAGAGTATGCAATGCACGGGCAATTTTCCGTCAAGTCAGATGTTTTCAGCTTTGGAGTACTAGTCTTAGA
AATTTTAAGTGGCCAAAAAAACACTTGTTTTAGAAATGGAGAATCGGTGGAAGACCTTCTGAGTTTTGCTTGGTCGAGCTGGCGTAATGG
AACAACTACAACTTTTATAGATCCAATGCTGAGGGAAAGCACAGGACTGATTCGTGACATAATGAGAAACATTCACATAGCTTTATTGTG
TGTTCAAGAAAGTGTGGCTGATAGACCAACCATGGCAGCTGTTGTTCTCATGCTCAGTAGTTTCTCGTTGAGTCTTCCAATGCCTTCAGG
GCCAGCATTCTATATGTACAGTAATGTTACCGCAGAGACGTCGCTTATTCAAGAATACAACACAAGAATGACAAACTCTAGTGAAGTAGC
CAAAAGTAATTCTATTGGTTCATCACGAAATGAGGCGTCCATATCTGAGTTATATCCTCGTTAACAATAATAAACTTTTTCTTTGAGTTT
ACTTATTTTATGTGTTCCTTGGTACCACTTCAAGTGTACGTGTATTCTAGCTAGCAGTTACTGTAAAGTTTTATTGAACTTGAGCTAAAT
ACATCTATATACGTTTTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (5)

Annotations (manual: 3 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128940	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	170

Preceding Unigenes (1)

Unigene	Build
SGN-U213785	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer