Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U580161 and SGN-U581118 in the current build, Tomato 200607 #2

Unigene SGN-U314041

Unigene Basic Information

Unigene ID:	SGN-U314041
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314041
mRNA sequence:	Length: 1866 bp

>SGN-U314041 Tomato 200607 #1 (54 members)
ACATTATAAATAAGAGCTTCTATCACATAATTTATTGCAAATCAAATTAGTCAACAACAACAACAACAAAAAAAAAAACTAACAGAAAGA
TGGAATGGGAATTGAGCTATCTGTTTTTTTCTTCAATCATCTTGTTATCAATTTTCATCCTATTTTTTTCTAAGAAAAATAGTACTTACA
ATTTACCTCCAGGGCCACCTGGATTACCAGTTTTTGGTAACATGTTTGAACTAGGAACAGAGAGCTACAAAAAAATGGCAGCTCTAAAAC
AGAAATATGGCCCTGTTTTGGGGTTAAAAGTTGGCACCTCAACAAATATTATGGTTGTTCAAACAGCTCAGGCTGCTGCAGAGTTATTCA
AAAACCATGATACTTCCTTCGCGGATCGACCACTGGTCGATGTGAATTCAGCACATAATTACTATCAAGGATCTCCGGCTTTAGCTCGAT
ATGGCCCCTTTTGGAGGTTTCAAAGACGGTTATGTACTGTGGAAATGTTTGTACACAAAAAGATCAGTGAAACAGTGCGAGTAAGGCGAA
AATGTGTGGATGATATGTTGAAATGGATAGAAAAAGCAGGGTGTTCTGCTGAAAAAGGAAGTGGAATTGAGGTAACGCGTTTTGTGTTCC
TAGCATCGTTTAATATGCTGGGGAATTTGATTCTATCGAAAGATTTGGCTGATCCTGAATCCGAGGAGGCCTCGGAGTTCTTCCATGCCA
TGAAGGGAATCATGGAGTGGTCAGGTGTTGCTAATGTTTCTGATGTATTTCCGTTTCTTAGAAAGTTTGATTTACAAAGTTTGAGGAAGA
AGATGACGCGAGACATGGGGAAGGCCATGGAGATCATGTCTATGTTACTCAAAGAACGAAAGAAAGGTATGGAGAAAATGAAAGATTTTT
TGGATGTGTTGCTTGAATTTGAAGGCACTGGAAAAGATGAACCAGCTAAATTATCAGAACATGAGATTAAAGTATTCATACTGGAATTGT
TTCTAGCTGGTACAGAGACGACAAGCAGTAGCGTTGAATGGGCACTAACAGAGCTTTTGCGCCATCCACAAGCAATGGCTGAAGTGAAAA
CAGAGATATCAAAAGCAGTAGGATCAAACAACAAGTTTGAAGAAAGTGATATCGAAAATCTTCCTTATATGCAAGCTGTAATCAAAGAAT
CACTTCGTTTACATCCTCCTCTCCCTTTCTTGATCCCAAGAGAGACAATTCAAGACACTAAGTTCATGGGGTACGACGTGCTAAAAGGGA
CTCGAGTCCTCGTAAATGCCTGGGCAATTGGAAGAGATCCTGAATGTTGGGACGACCCTATGAGTTTCAAGCCCGAGAGGTTTCTTGGCT
CGAAATTGGACGTGAAGGGTCAGCATTATGAGCTAATTCCATTTGGTGCAGGACGAAGAATGTGTGTTGGTTTGCCTTTAGGCCATCGAA
TGATGCATTTCGCTCTTGGATCGTTGCTTCATGAATTCGATTGGGAGCTTCCAGATGGTGTGTCTCCTAAATCTATTAATATGGATGAAA
GCATGGGAGTAACAGCTAGAAAACGCGACTCTTTGAAAGTGATTCCAAAAAAGGTTTGACGACTTACTGGATAGTTATTACATATTATTT
CATAATATATCGTTTTAATATATATAATGTTTCGATACATAACATTGTTTTCCCATTATCACATACAATAGGTAACGTATAACTTATCTG
GATATAGTTGTTACGGTCAAAAAACGCAACTCTTTGAAAATATTATCAAAAGAATGCTATATATAGTTATTGTATATCGTTTTATAATAT
ATCATATTATTTTAATAAAAATAATGTTTGAATAAATAAAAAAAAAAAAAAACTCGAGACTAGTTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	33
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (54)

Alignment image suppressed for unigene with 54 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118409	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	540
5	128928	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	519

Preceding Unigenes (1)

Unigene	Build
SGN-U213748	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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