Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567668 in the current build, Tomato 200607 #2

Unigene SGN-U314087

Unigene Basic Information

Unigene ID:	SGN-U314087
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314087
mRNA sequence:	Length: 1822 bp

>SGN-U314087 Tomato 200607 #1 (51 members)
TATCCTACCCACCCTTTTATATAATGTGTAGAGAAGAAGCAAAGGGAGAGAAGAAACAAACACATGGCTATTGCAATTTTCATAGCTTTG
GCCATATTTTTTCCTTTCACTTTTTGGTGCCTAAAATTGCTCTACTTTGTATGGTGGCGTCCGAAAACAGTAGAAAATGAACTGCGTCAT
CAAGGAATCTATGGGCGTCCCTATAGATTTCTATTTGGAAATCTAAAAGAGATGATAGAGATGAACAAAATAGCCAAATCTAAACCCATG
CCATTGCACCACGATTTCACACCTCGACTTAATCCATTGTTCTATGAACTCGCTACCACTTACAAGAAACTTTACTTGTTTTGGCTAGGA
CCCATCCCTCGATTAACCATTTTGGATCCCAAGTTAATAAAGGAAGTACTGTCAAACAAATCTGGTGAGTTCAGAAAACCAAAAATCAGT
GCTTTTCTGAAGCTATTTGTAACAGGGCTAGGGACTTACGATGGGGAAAAATGGGCCAAACATCGAAAAATTCTTAATCCGGCATTCCAC
ATGGAAAAATTGAAGGTGATGCTGGGATTATTTGTTGAATGCACGGATGACATGATAAGCAGATGGGATAAGCTAACGGGTTCAACGGGT
TCTTGTGAATTGGATATTTCTCAAGAATTTCATAATTTAACTGGAGATATGCTATCGAAAGCAGCTTTCGGTAGCAATTTTGAAGAAGGG
AAATTGGTATTTTCACTTCTGAGAGAGCAATGTGAACTAATTTTCACTGCAAAGCTTGCTATTAATGTCTTCCCATGGTTAAGGTTTGTG
CCAACGAAAACTAATAGGAGAAGATTGTACATCTATAACACAGTTCGTAGTTCGTTAAAATCAATCATTGAGAAACGAGAGAAAGAGGTA
CAATCTGGAAAATCACACAACGAAGATCTATTGGGTTTGTTGATGAAATCTAATCAGGAAGAACAGCAAGGGAATAAGAACTCGAATAAA
GGAATGAGTACAGAGGATATGATAGAAGAGTGTAACTCTTTCTACTTTGCTGGTCAAGAGACTACTGCAACTTTGTTAACATGGACTGCA
ATTGTGTTGACTATGCATCCAGATTGGCAAGAGAAAGCTAGGAAAGAAGTTCTTCAAGTCATTGGAAAAGATGAACCTAAGTTTGATCAA
CTCAACCACCTAAAGATTGTAACAATGATTTTGCACGAGGTTCTGAGGCTCTATCCATCAGGTTCTCTCGTTAGAGAAACAAACAAAAAA
ACAAAGCTCGGAGGGTATACAATCCCAGCAGGTGCGCAACTTTTAGTGCCTCTACAAACAATTCATCGGGATACAGAGGCATGGGGTGAA
GATGCATTAATTTTCAATCCAGAAAGGTTTTCAGAAGGGGTATCAAAAGCATCAAAGGACCTGATGTACTTCCCATTTGGTTGGGGTTCT
CGGATATGCCTTGGAATGAATGTTTCGATGATTCAAGGGAAGCTTGTTTTGGCTAAAATCTTACAGAACTACTCATTTGAGCTTTCCCCA
TCCTATGCTCATGGTCCAACAATGCCAGCTCTTGTTCTACAACCACAATATGGTGCTCCTATGATTGTTCGAAAGCTAGAATGATCAATA
AATCACTTCTATCTTGTCAACTATAAGCACAATTACAGGATGCTTAAATTTAATGTTTCAATCAGTTTATTGGTTGGTTAATGGTTACTG
AATTTAGACAAATCTCTTCGAGTTTTTTATATGTTATGAAGCTAACTATGCTCCTCTGTTTCCTCCTCTTAAAATAAACAAGAACCAATT
ACGCTCCTTCAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	9
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	8
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	7
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	7
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2

mRNA member sequences (51)

Alignment image suppressed for unigene with 51 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (9)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118455	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	121
5	128959	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U213859	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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